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5L13
Asym. Unit
Info
Asym.Unit (659 KB)
Biol.Unit 1 (333 KB)
Biol.Unit 2 (327 KB)
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(1)
Title
:
STRUCTURE OF ALDH2 IN COMPLEX WITH 2P3
Authors
:
C. D. Buchman, T. D. Hurley
Date
:
28 Jul 16 (Deposition) - 08 Mar 17 (Release) - 05 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Oxidoreductase-Oxidoreductase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. D. Buchman, T. D. Hurley
Inhibition Of The Aldehyde Dehydrogenase 1/2 Family By Psoralen And Coumarin Derivatives.
J. Med. Chem. V. 60 2439 2017
[
close entry info
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Hetero Components
(4, 44)
Info
All Hetero Components
1a: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEa)
1b: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEb)
1c: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEc)
1d: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEd)
1e: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEe)
1f: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEf)
1g: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEg)
1h: 2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3... (6ZEh)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
3a: GUANIDINE (GAIa)
3b: GUANIDINE (GAIb)
3c: GUANIDINE (GAIc)
3d: GUANIDINE (GAId)
3e: GUANIDINE (GAIe)
3f: GUANIDINE (GAIf)
3g: GUANIDINE (GAIg)
3h: GUANIDINE (GAIh)
3i: GUANIDINE (GAIi)
3j: GUANIDINE (GAIj)
3k: GUANIDINE (GAIk)
3l: GUANIDINE (GAIl)
3m: GUANIDINE (GAIm)
3n: GUANIDINE (GAIn)
3o: GUANIDINE (GAIo)
3p: GUANIDINE (GAIp)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
4c: SODIUM ION (NAc)
4d: SODIUM ION (NAd)
4e: SODIUM ION (NAe)
4f: SODIUM ION (NAf)
4g: SODIUM ION (NAg)
4h: SODIUM ION (NAh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
6ZE
8
Ligand/Ion
2,3,5-TRIMETHYL-6-PROPYL-7H-FURO[3,2-G][1]BENZOPYRAN-7-ONE
2
EDO
12
Ligand/Ion
1,2-ETHANEDIOL
3
GAI
16
Ligand/Ion
GUANIDINE
4
NA
8
Ligand/Ion
SODIUM ION
[
close Hetero Component info
]
Sites
(44, 44)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:39 , VAL A:40 , ASP A:109 , GLN A:196 , HOH A:707
binding site for residue NA A 601
02
AC2
SOFTWARE
TYR A:153 , ARG A:155 , ASN B:440 , SER B:443 , GLN B:444 , PHE D:151
binding site for residue EDO A 602
03
AC3
SOFTWARE
PHE A:18 , ASP A:98 , TYR A:101 , TYR A:203 , HOH A:712
binding site for residue EDO A 603
04
AC4
SOFTWARE
GLU A:157 , PRO A:158 , VAL A:159 , TYR B:468
binding site for residue GAI A 604
05
AC5
SOFTWARE
PHE A:459 , HOH A:756 , ASP B:147 , PHE B:150
binding site for residue GAI A 605
06
AC6
SOFTWARE
PHE A:170 , MET A:174 , PHE A:296 , CYS A:301 , CYS A:302 , CYS A:303 , ASP A:457 , PHE A:459
binding site for residue 6ZE A 606
07
AC7
SOFTWARE
THR B:39 , VAL B:40 , ASP B:109 , GLN B:196
binding site for residue NA B 601
08
AC8
SOFTWARE
ASN A:440 , SER A:443 , TYR B:153 , ARG B:155 , PHE C:151
binding site for residue EDO B 602
09
AC9
SOFTWARE
PHE B:151 , TYR C:153 , ARG C:155 , ASN D:440 , SER D:443
binding site for residue EDO B 603
10
AD1
SOFTWARE
TYR A:468 , GLU B:157 , PRO B:158 , VAL B:159
binding site for residue GAI B 604
11
AD2
SOFTWARE
PHE B:170 , MET B:174 , TRP B:177 , PHE B:296 , CYS B:301 , CYS B:302 , CYS B:303 , ASP B:457 , PHE B:459
binding site for residue 6ZE B 605
12
AD3
SOFTWARE
THR C:39 , VAL C:40 , ASP C:109 , GLN C:196 , HOH C:880
binding site for residue NA C 601
13
AD4
SOFTWARE
GLU C:157 , PRO C:158 , VAL C:159 , HOH C:882 , HOH C:884 , GLN D:447 , TYR D:468
binding site for residue GAI C 602
14
AD5
SOFTWARE
VAL C:120 , MET C:124 , PHE C:170 , MET C:174 , PHE C:296 , CYS C:301 , CYS C:302 , CYS C:303 , ASP C:457 , PHE C:459
binding site for residue 6ZE C 603
15
AD6
SOFTWARE
THR D:39 , VAL D:40 , ASP D:109 , GLN D:196 , HOH D:795 , HOH D:832
binding site for residue NA D 601
16
AD7
SOFTWARE
PHE D:18 , TYR D:101 , TYR D:203
binding site for residue EDO D 602
17
AD8
SOFTWARE
PHE C:459 , ILE D:146 , ASP D:147 , PHE D:150
binding site for residue GAI D 603
18
AD9
SOFTWARE
TYR C:468 , GLU D:157 , PRO D:158 , VAL D:159 , HOH D:737
binding site for residue GAI D 604
19
AE1
SOFTWARE
PRO D:167 , TRP D:168 , ASN D:169
binding site for residue GAI D 605
20
AE2
SOFTWARE
ASP C:147 , PHE D:459 , HOH D:826
binding site for residue GAI D 606
21
AE3
SOFTWARE
MET D:124 , PHE D:170 , MET D:174 , TRP D:177 , GLU D:268 , PHE D:296 , CYS D:301 , CYS D:302 , CYS D:303 , ASP D:457 , PHE D:459 , PHE D:465
binding site for residue 6ZE D 607
22
AE4
SOFTWARE
THR E:39 , VAL E:40 , ASP E:109 , GLN E:196 , HOH E:718 , HOH E:847
binding site for residue NA E 601
23
AE5
SOFTWARE
TYR E:153 , ARG E:155 , SER F:443 , PHE H:151
binding site for residue EDO E 602
24
AE6
SOFTWARE
PRO E:496 , ILE G:413
binding site for residue EDO E 603
25
AE7
SOFTWARE
GLU E:157 , PRO E:158 , VAL E:159
binding site for residue GAI E 604
26
AE8
SOFTWARE
ILE E:146 , ASP E:147 , PHE E:150 , PHE F:459
binding site for residue GAI E 605
27
AE9
SOFTWARE
GLY E:225 , ALA E:230
binding site for residue GAI E 606
28
AF1
SOFTWARE
VAL E:120 , PHE E:170 , MET E:174 , TRP E:177 , PHE E:296 , CYS E:301 , CYS E:302 , CYS E:303 , ASP E:457 , PHE E:459
binding site for residue 6ZE E 607
29
AF2
SOFTWARE
THR F:39 , VAL F:40 , ASP F:109 , GLN F:196
binding site for residue NA F 601
30
AF3
SOFTWARE
ASN E:440 , SER E:443 , TYR F:153 , ARG F:155
binding site for residue EDO F 602
31
AF4
SOFTWARE
PHE F:18 , ASP F:98 , TYR F:203
binding site for residue EDO F 603
32
AF5
SOFTWARE
GLU F:157 , PRO F:158 , VAL F:159
binding site for residue GAI F 604
33
AF6
SOFTWARE
PHE F:170 , MET F:174 , TRP F:177 , PHE F:292 , PHE F:296 , CYS F:301 , CYS F:302 , CYS F:303 , ASP F:457 , PHE F:459
binding site for residue 6ZE F 605
34
AF7
SOFTWARE
THR G:39 , VAL G:40 , ASP G:109 , GLN G:196
binding site for residue NA G 601
35
AF8
SOFTWARE
PHE F:151 , TYR G:153 , ARG G:155 , SER H:443
binding site for residue EDO G 602
36
AF9
SOFTWARE
GLN E:497 , TYR G:441 , GLN G:444 , ALA G:445 , HOH G:758 , HOH G:801
binding site for residue EDO G 603
37
AG1
SOFTWARE
ASN G:41 , THR G:44 , GLU G:46 , ILE G:48 , LEU G:108
binding site for residue EDO G 604
38
AG2
SOFTWARE
GLU G:157 , PRO G:158 , VAL G:159 , HOH G:789 , HOH G:792 , TYR H:468
binding site for residue GAI G 605
39
AG3
SOFTWARE
ASP G:147 , PHE G:150 , PHE H:459
binding site for residue GAI G 606
40
AG4
SOFTWARE
TYR G:101 , TYR G:203
binding site for residue GAI G 607
41
AG5
SOFTWARE
PHE G:170 , MET G:174 , PHE G:296 , CYS G:301 , CYS G:302 , CYS G:303 , ASP G:457 , PHE G:459
binding site for residue 6ZE G 608
42
AG6
SOFTWARE
THR H:39 , VAL H:40 , ASP H:109 , GLN H:196 , HOH H:728
binding site for residue NA H 601
43
AG7
SOFTWARE
TYR G:468 , GLU H:157 , PRO H:158 , VAL H:159 , HOH H:819 , HOH H:825
binding site for residue GAI H 602
44
AG8
SOFTWARE
MET H:124 , PHE H:170 , LEU H:173 , MET H:174 , TRP H:177 , PHE H:296 , CYS H:301 , CYS H:302 , CYS H:303 , ASP H:457 , PHE H:459
binding site for residue 6ZE H 603
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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