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5L07
Biol. Unit 1
Info
Asym.Unit (125 KB)
Biol.Unit 1 (117 KB)
Biol.Unit 2 (232 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF QUORUM-SENSING TRANSCRIPTIONAL ACTIVATOR FROM YERSINIA ENTEROCOLITICA
Authors
:
Y. Kim, G. Chhor, R. Jedrzejczak, S. C. Winans, W. F. Anderson, A. Joachi Center For Structural Genomics Of Infectious Diseases (Csgi
Date
:
26 Jul 16 (Deposition) - 07 Sep 16 (Release) - 08 Feb 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Keywords
:
Alpha-Beta Structure, Pheromone Binding Protein, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Kim, G. Chhor, R. Jedrzejczak, S. C. Winans, A. Joachimiak, Csgid
Crystal Structure Of Quorum-Sensing Transcriptional Activator From Yersinia Enterocolitica
To Be Published
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Hetero Components
(4, 23)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACY
5
Ligand/Ion
ACETIC ACID
2
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
3
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
4
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:13 , LYS A:16 , ARG A:21 , LYS A:24
binding site for residue SO4 A 201
02
AC2
SOFTWARE
ASP A:84 , ASN A:85 , SER A:86 , HOH A:302 , HOH A:308
binding site for residue SO4 A 202
03
AC3
SOFTWARE
ASN A:17 , TYR A:18 , ARG A:21 , ARG A:22 , HOH A:303
binding site for residue SO4 A 203
04
AC4
SOFTWARE
TYR A:18 , ARG A:22 , LYS B:60
binding site for residue SO4 A 204
05
AC5
SOFTWARE
SER A:32 , ASP A:67 , ILE A:70 , ASN A:125
binding site for residue ACY A 205
06
AC6
SOFTWARE
ILE A:142 , ASN A:143 , GLU A:145 , LYS A:146
binding site for residue ACY A 206
07
AC7
SOFTWARE
LYS A:16 , LYS A:24
binding site for residue EDO A 207
08
AC8
SOFTWARE
LYS A:74 , ASN B:117
binding site for residue EDO B 201
09
AC9
SOFTWARE
ASN A:108 , ASN A:128 , SER A:133 , ARG B:21
binding site for residue ACY B 202
10
AD1
SOFTWARE
SER B:32 , TRP B:54 , TYR B:58 , ASP B:67 , ILE B:70 , ACY B:208
binding site for residue ACY B 203
11
AD2
SOFTWARE
ASP A:75 , LYS A:76 , ASP B:116 , ASN B:117 , SER B:118 , HOH B:301 , HOH B:319
binding site for residue EDO B 204
12
AD3
SOFTWARE
TYR B:18 , ARG B:22 , HOH B:333
binding site for residue EDO B 205
13
AD4
SOFTWARE
ASN B:105 , VAL B:107 , ASN B:108 , ASN B:128
binding site for residue EDO B 206
14
AD5
SOFTWARE
THR B:40 , LEU B:42 , ASP B:83 , ASN B:108 , GLY B:109 , ASP B:137 , HOH B:314
binding site for residue EDO B 207
15
AD6
SOFTWARE
ASP B:67 , VAL B:69 , PHE B:98 , ACY B:203
binding site for residue ACY B 208
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (125 KB)
Header - Asym.Unit
Biol.Unit 1 (117 KB)
Header - Biol.Unit 1
Biol.Unit 2 (232 KB)
Header - Biol.Unit 2
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