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5KSH
Biol. Unit 2
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Asym.Unit (293 KB)
Biol.Unit 1 (149 KB)
Biol.Unit 2 (142 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 2 FROM NEISSERIA GONORRHOEAE CONTAINING AN A501T MUTATION ASSOCIATED WITH CEPHALOSPORIN RESISTANCE
Authors
:
A. Fedarovich, C. Davies
Date
:
08 Jul 16 (Deposition) - 01 Mar 17 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Biosynthetic Protein, Class B Transpeptidase, Peptidoglycan Synthesis
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Reference
:
J. Tomberg, A. Fedarovich, L. R. Vincent, A. E. Jerse, M. Unemo, C. Davies, R. A. Nicholas
Alanine 501 Mutations In Penicillin-Binding Protein 2 From Neisseria Gonorrhoeae: Structure, Mechanism, And Effects On Cephalosporin Resistance And Biological Fitness.
Biochemistry V. 56 1140 2017
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
2a: PHOSPHOSERINE (SEPa)
2b: PHOSPHOSERINE (SEPb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
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No.
Name
Count
Type
Full Name
1
GOL
2
Ligand/Ion
GLYCEROL
2
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
3
SO4
7
Ligand/Ion
SULFATE ION
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Sites
(10, 10)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC7 (SOFTWARE)
03: AC8 (SOFTWARE)
04: AC9 (SOFTWARE)
05: AD1 (SOFTWARE)
06: AD2 (SOFTWARE)
07: AD3 (SOFTWARE)
08: AD4 (SOFTWARE)
09: AD5 (SOFTWARE)
10: AD6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
ARG A:67 , ARG A:211 , ARG B:408
binding site for residue SO4 A 602
02
AC7
SOFTWARE
GLU B:190 , GLY B:191 , ARG B:297 , ARG B:298 , ASN B:299 , THR B:303 , PRO B:397
binding site for residue GOL B 601
03
AC8
SOFTWARE
TYR B:284 , ASP B:285 , ARG B:288 , ARG B:291 , ALA B:292 , GLN B:296 , SO4 B:608
binding site for residue GOL B 602
04
AC9
SOFTWARE
SER B:342 , LYS B:361 , ARG B:411
binding site for residue SO4 B 603
05
AD1
SOFTWARE
GLN A:457 , ARG B:288
binding site for residue SO4 B 604
06
AD2
SOFTWARE
ARG B:288 , PRO B:289 , GLY B:290
binding site for residue SO4 B 605
07
AD3
SOFTWARE
SER B:294 , ARG B:297
binding site for residue SO4 B 606
08
AD4
SOFTWARE
GLU A:59 , GLN A:60 , ARG B:345 , ASN B:406 , ARG B:409
binding site for residue SO4 B 607
09
AD5
SOFTWARE
PRO A:446 , ARG B:291 , GOL B:602
binding site for residue SO4 B 608
10
AD6
SOFTWARE
ASP B:293 , SER B:294 , ARG B:297
binding site for residue SO4 B 609
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SAPs(SNPs)/Variants
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SCOP Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (293 KB)
Header - Asym.Unit
Biol.Unit 1 (149 KB)
Header - Biol.Unit 1
Biol.Unit 2 (142 KB)
Header - Biol.Unit 2
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