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Asym. Unit
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Asym.Unit (2.5 MB)
Biol.Unit 1, α-C (1.3 MB)
Biol.Unit 1 (1.3 MB)
Biol.Unit 2, α-C (1.3 MB)
Biol.Unit 2 (1.3 MB)
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Title
:
STRUCTURE FUNCTION STUDIES OF R. PALUSTRIS RUBISCO (K192C MUTANT; CABP-BOUND)
Authors
:
M. A. Arbing, J. A. North, S. Satagopan, F. R. Tabita
Date
:
01 Jul 16 (Deposition) - 05 Jul 17 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: G,H,I,J,K,L (1x)
Keywords
:
Rubisco, Hexamer, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Arbing, J. A. North, S. Satagopan, V. A. Varaljay, A. Shin, F. R. Tabita
Structure Function Studies Of R. Palustris Rubisco.
To Be Published
[
close entry info
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Hetero Components
(3, 36)
Info
All Hetero Components
1a: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPa)
1b: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPb)
1c: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPc)
1d: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPd)
1e: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPe)
1f: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPf)
1g: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPg)
1h: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPh)
1i: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPi)
1j: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPj)
1k: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPk)
1l: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPl)
2a: CARBONATE ION (CO3a)
2b: CARBONATE ION (CO3b)
2c: CARBONATE ION (CO3c)
2d: CARBONATE ION (CO3d)
2e: CARBONATE ION (CO3e)
2f: CARBONATE ION (CO3f)
2g: CARBONATE ION (CO3g)
2h: CARBONATE ION (CO3h)
2i: CARBONATE ION (CO3i)
2j: CARBONATE ION (CO3j)
2k: CARBONATE ION (CO3k)
2l: CARBONATE ION (CO3l)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
3g: MAGNESIUM ION (MGg)
3h: MAGNESIUM ION (MGh)
3i: MAGNESIUM ION (MGi)
3j: MAGNESIUM ION (MGj)
3k: MAGNESIUM ION (MGk)
3l: MAGNESIUM ION (MGl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CAP
12
Ligand/Ion
2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
2
CO3
12
Ligand/Ion
CARBONATE ION
3
MG
12
Ligand/Ion
MAGNESIUM ION
[
close Hetero Component info
]
Sites
(36, 36)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:165 , LYS A:167 , LYS A:169 , ASP A:194 , GLU A:195 , HIS A:288 , ARG A:289 , HIS A:322 , LYS A:330 , SER A:369 , GLY A:370 , GLY A:371 , ALA A:393 , GLY A:394 , GLY A:395 , MG A:501 , CO3 A:502 , HOH A:604 , HOH A:640 , HOH A:646 , HOH A:648 , HOH A:680 , HOH A:681 , HOH A:693 , GLU B:49 , THR B:54 , ASN B:112 , HOH B:603 , HOH B:705
binding site for residue CAP A 500
02
AC2
SOFTWARE
LYS A:167 , LYS A:169 , ASP A:194 , GLU A:195 , CAP A:500 , CO3 A:502 , ASN B:112
binding site for residue MG A 501
03
AC3
SOFTWARE
CYS A:192 , ASN A:193 , ASP A:194 , GLU A:195 , LEU A:262 , HIS A:288 , HIS A:322 , CAP A:500 , MG A:501 , HOH A:663
binding site for residue CO3 A 502
04
AC4
SOFTWARE
GLU A:49 , THR A:54 , ASN A:112 , ILE B:165 , LYS B:167 , LYS B:169 , ASP B:194 , GLU B:195 , HIS B:288 , ARG B:289 , HIS B:292 , HIS B:322 , LYS B:330 , MET B:331 , SER B:369 , GLY B:370 , GLY B:371 , GLY B:394 , GLY B:395 , MG B:501 , CO3 B:502 , HOH B:605 , HOH B:607 , HOH B:625 , HOH B:666
binding site for residue CAP B 500
05
AC5
SOFTWARE
ASN A:112 , ASP B:194 , GLU B:195 , CAP B:500 , CO3 B:502
binding site for residue MG B 501
06
AC6
SOFTWARE
ILE B:165 , ASN B:193 , ASP B:194 , GLU B:195 , LEU B:262 , HIS B:288 , HIS B:322 , CAP B:500 , MG B:501 , HOH B:628
binding site for residue CO3 B 502
07
AC7
SOFTWARE
ILE C:165 , LYS C:167 , LYS C:169 , ASP C:194 , GLU C:195 , HIS C:288 , ARG C:289 , HIS C:322 , LYS C:330 , SER C:369 , GLY C:370 , GLY C:371 , ALA C:393 , GLY C:394 , GLY C:395 , MG C:501 , CO3 C:502 , HOH C:608 , HOH C:629 , HOH C:640 , HOH C:645 , HOH C:649 , HOH C:666 , HOH C:686 , HOH C:701 , GLU D:49 , THR D:54 , ASN D:112 , HOH D:652
binding site for residue CAP C 500
08
AC8
SOFTWARE
LYS C:169 , ASP C:194 , GLU C:195 , CAP C:500 , CO3 C:502 , ASN D:112
binding site for residue MG C 501
09
AC9
SOFTWARE
ILE C:165 , CYS C:192 , ASN C:193 , ASP C:194 , GLU C:195 , LEU C:262 , HIS C:288 , HIS C:322 , CAP C:500 , MG C:501 , HOH C:638
binding site for residue CO3 C 502
10
AD1
SOFTWARE
GLU C:49 , THR C:54 , ASN C:112 , HOH C:621 , ILE D:165 , LYS D:167 , LYS D:169 , ASP D:194 , GLU D:195 , HIS D:288 , ARG D:289 , HIS D:322 , LYS D:330 , MET D:331 , SER D:369 , GLY D:370 , GLY D:371 , GLY D:394 , GLY D:395 , MG D:501 , CO3 D:502 , HOH D:620 , HOH D:628 , HOH D:637 , HOH D:664 , HOH D:675 , HOH D:690 , HOH D:723
binding site for residue CAP D 500
11
AD2
SOFTWARE
LYS D:169 , ASP D:194 , GLU D:195 , CAP D:500 , CO3 D:502
binding site for residue MG D 501
12
AD3
SOFTWARE
ILE D:165 , CYS D:192 , ASN D:193 , ASP D:194 , GLU D:195 , LEU D:262 , HIS D:288 , CAP D:500 , MG D:501 , HOH D:666
binding site for residue CO3 D 502
13
AD4
SOFTWARE
ILE E:165 , LYS E:167 , LYS E:169 , ASP E:194 , GLU E:195 , HIS E:288 , ARG E:289 , HIS E:322 , LYS E:330 , MET E:331 , SER E:369 , GLY E:370 , GLY E:371 , GLY E:394 , GLY E:395 , MG E:501 , CO3 E:502 , HOH E:612 , HOH E:620 , HOH E:625 , HOH E:650 , HOH E:662 , HOH E:674 , HOH E:684 , GLU F:49 , THR F:54 , ASN F:112
binding site for residue CAP E 500
14
AD5
SOFTWARE
ASP E:194 , GLU E:195 , CAP E:500 , CO3 E:502 , ASN F:112
binding site for residue MG E 501
15
AD6
SOFTWARE
ILE E:165 , CYS E:192 , ASN E:193 , ASP E:194 , GLU E:195 , LEU E:262 , HIS E:288 , HIS E:322 , CAP E:500 , MG E:501 , HOH E:661
binding site for residue CO3 E 502
16
AD7
SOFTWARE
GLU E:49 , THR E:54 , ASN E:112 , ILE F:165 , LYS F:167 , LYS F:169 , ASP F:194 , GLU F:195 , HIS F:288 , ARG F:289 , HIS F:322 , LYS F:330 , SER F:369 , GLY F:370 , GLY F:371 , GLY F:394 , GLY F:395 , MG F:501 , CO3 F:502 , HOH F:603 , HOH F:614 , HOH F:625 , HOH F:635 , HOH F:654 , HOH F:676
binding site for residue CAP F 500
17
AD8
SOFTWARE
ASP F:194 , GLU F:195 , CAP F:500 , CO3 F:502
binding site for residue MG F 501
18
AD9
SOFTWARE
ILE F:165 , ASN F:193 , ASP F:194 , GLU F:195 , LEU F:262 , HIS F:288 , HIS F:322 , CAP F:500 , MG F:501 , HOH F:607
binding site for residue CO3 F 502
19
AE1
SOFTWARE
ILE G:165 , LYS G:167 , LYS G:169 , ASP G:194 , GLU G:195 , HIS G:288 , ARG G:289 , HIS G:322 , LYS G:330 , SER G:369 , GLY G:370 , GLY G:371 , ALA G:393 , GLY G:394 , GLY G:395 , MG G:501 , CO3 G:502 , HOH G:602 , HOH G:604 , HOH G:610 , HOH G:650 , HOH G:660 , HOH G:679 , HOH G:681 , GLU H:49 , THR H:54 , ASN H:112 , HOH H:608 , HOH H:701
binding site for residue CAP G 500
20
AE2
SOFTWARE
LYS G:169 , ASP G:194 , GLU G:195 , CAP G:500 , CO3 G:502 , ASN H:112
binding site for residue MG G 501
21
AE3
SOFTWARE
ILE G:165 , CYS G:192 , ASN G:193 , ASP G:194 , GLU G:195 , LEU G:262 , HIS G:288 , HIS G:322 , CAP G:500 , MG G:501 , HOH G:661
binding site for residue CO3 G 502
22
AE4
SOFTWARE
GLU G:49 , THR G:54 , ASN G:112 , HOH G:618 , ILE H:165 , LYS H:167 , LYS H:169 , ASP H:194 , GLU H:195 , HIS H:288 , ARG H:289 , HIS H:322 , LYS H:330 , SER H:369 , GLY H:370 , GLY H:371 , ALA H:393 , GLY H:394 , GLY H:395 , MG H:501 , CO3 H:502 , HOH H:605 , HOH H:607 , HOH H:642 , HOH H:645 , HOH H:655 , HOH H:657 , HOH H:670
binding site for residue CAP H 500
23
AE5
SOFTWARE
LYS H:169 , ASP H:194 , GLU H:195 , CAP H:500 , CO3 H:502
binding site for residue MG H 501
24
AE6
SOFTWARE
ILE H:165 , CYS H:192 , ASN H:193 , ASP H:194 , GLU H:195 , LEU H:262 , HIS H:288 , HIS H:322 , CAP H:500 , MG H:501 , HOH H:650
binding site for residue CO3 H 502
25
AE7
SOFTWARE
ILE I:165 , LYS I:167 , LYS I:169 , ASP I:194 , GLU I:195 , HIS I:288 , ARG I:289 , HIS I:322 , LYS I:330 , MET I:331 , SER I:369 , GLY I:370 , GLY I:371 , GLY I:394 , GLY I:395 , MG I:501 , CO3 I:502 , HOH I:608 , HOH I:632 , HOH I:638 , HOH I:647 , HOH I:667 , HOH I:693 , THR J:54 , ASN J:112 , HOH J:687
binding site for residue CAP I 500
26
AE8
SOFTWARE
LYS I:169 , ASP I:194 , GLU I:195 , CAP I:500 , CO3 I:502
binding site for residue MG I 501
27
AE9
SOFTWARE
ILE I:165 , CYS I:192 , ASN I:193 , ASP I:194 , GLU I:195 , LEU I:262 , HIS I:288 , HIS I:322 , CAP I:500 , MG I:501 , HOH I:606
binding site for residue CO3 I 502
28
AF1
SOFTWARE
GLU I:49 , THR I:54 , ASN I:112 , HOH I:665 , ILE J:165 , LYS J:167 , LYS J:169 , ASP J:194 , GLU J:195 , HIS J:288 , ARG J:289 , HIS J:322 , LYS J:330 , MET J:331 , SER J:369 , GLY J:370 , GLY J:371 , ALA J:393 , GLY J:394 , GLY J:395 , MG J:501 , CO3 J:502 , HOH J:605 , HOH J:611 , HOH J:632 , HOH J:669 , HOH J:704
binding site for residue CAP J 500
29
AF2
SOFTWARE
ASN I:112 , LYS J:169 , ASP J:194 , GLU J:195 , CAP J:500 , CO3 J:502
binding site for residue MG J 501
30
AF3
SOFTWARE
ILE J:165 , CYS J:192 , ASN J:193 , ASP J:194 , GLU J:195 , LEU J:262 , HIS J:288 , HIS J:322 , CAP J:500 , MG J:501 , HOH J:618
binding site for residue CO3 J 502
31
AF4
SOFTWARE
ILE K:165 , LYS K:167 , LYS K:169 , ASP K:194 , GLU K:195 , HIS K:288 , ARG K:289 , HIS K:322 , LYS K:330 , MET K:331 , SER K:369 , GLY K:370 , GLY K:371 , ALA K:393 , GLY K:394 , GLY K:395 , MG K:501 , CO3 K:502 , HOH K:1612 , HOH K:1619 , HOH K:1658 , HOH K:1671 , HOH K:1677 , HOH K:1684 , GLU L:49 , THR L:54 , ASN L:112 , HOH L:630
binding site for residue CAP K 500
32
AF5
SOFTWARE
LYS K:169 , ASP K:194 , GLU K:195 , CAP K:500 , CO3 K:502
binding site for residue MG K 501
33
AF6
SOFTWARE
ILE K:165 , CYS K:192 , ASN K:193 , ASP K:194 , GLU K:195 , HIS K:288 , HIS K:322 , CAP K:500 , MG K:501 , HOH K:1610
binding site for residue CO3 K 502
34
AF7
SOFTWARE
GLU K:49 , THR K:54 , ASN K:112 , HOH K:1693 , ILE L:165 , LYS L:167 , LYS L:169 , ASP L:194 , GLU L:195 , HIS L:288 , ARG L:289 , HIS L:322 , LYS L:330 , MET L:331 , SER L:369 , GLY L:370 , GLY L:371 , ALA L:393 , GLY L:394 , GLY L:395 , MG L:501 , CO3 L:502 , HOH L:604 , HOH L:605 , HOH L:633 , HOH L:648 , HOH L:651 , HOH L:660 , HOH L:697
binding site for residue CAP L 500
35
AF8
SOFTWARE
ASN K:112 , LYS L:169 , ASP L:194 , GLU L:195 , CAP L:500 , CO3 L:502
binding site for residue MG L 501
36
AF9
SOFTWARE
ILE L:165 , CYS L:192 , ASN L:193 , ASP L:194 , GLU L:195 , LEU L:262 , HIS L:288 , HIS L:322 , CAP L:500 , MG L:501 , HOH L:602
binding site for residue CO3 L 502
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