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5K2A
Asym. Unit
Info
Asym.Unit (81 KB)
Biol.Unit 1 (74 KB)
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(1)
Title
:
2.5 ANGSTROM A2A ADENOSINE RECEPTOR STRUCTURE WITH SULFUR SAD PHASING USING XFEL DATA
Authors
:
A. Batyuk, L. Galli, A. Ishchenko, G. W. Han, C. Gati, P. Popov, M. -Y. Lee B. Stauch, T. A. White, A. Barty, A. Aquila, M. S. Hunter, M. Liang, S. Bo M. Pu, Z. -J. Liu, G. Nelson, D. James, C. Li, Y. Zhao, J. C. H. Spence, W. L P. Fromme, V. Katritch, U. Weierstall, R. C. Stevens, V. Cherezov, Gpc (Gpcr)
Date
:
18 May 16 (Deposition) - 21 Sep 16 (Release) - 23 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
A2A Adenosine Receptor, Membrane Protein, Gpcr, Structural Genomics, Psi-Biology, Gpcr Network
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Batyuk, L. Galli, A. Ishchenko, G. W. Han, C. Gati, P. A. Popov, M. Y. Lee, B. Stauch, T. A. White, A. Barty, A. Aquila, M. S. Hunter, M. Liang, S. Boutet, M. Pu, Z. J. Liu, G. Nelson, D. James, C. Li, Y. Zhao, J. C. Spence, W. Liu, P. Fromme, V. Katritch, U. Weierstall, R. C. Stevens, V. Cherezov
Native Phasing Of X-Ray Free-Electron Laser Data For A G Protein-Coupled Receptor.
Sci Adv V. 2 00292 2016
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Hetero Components
(6, 26)
Info
All Hetero Components
1a: CHOLESTEROL (CLRa)
1b: CHOLESTEROL (CLRb)
1c: CHOLESTEROL (CLRc)
2a: SODIUM ION (NAa)
3a: OLEIC ACID (OLAa)
3b: OLEIC ACID (OLAb)
3c: OLEIC ACID (OLAc)
3d: OLEIC ACID (OLAd)
3e: OLEIC ACID (OLAe)
3f: OLEIC ACID (OLAf)
3g: OLEIC ACID (OLAg)
3h: OLEIC ACID (OLAh)
3i: OLEIC ACID (OLAi)
3j: OLEIC ACID (OLAj)
4a: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCa)
4b: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCb)
4c: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCc)
4d: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCd)
4e: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCe)
4f: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCf)
4g: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCg)
4h: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCh)
4i: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCi)
4j: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCj)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
6a: 4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]... (ZMAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CLR
3
Ligand/Ion
CHOLESTEROL
2
NA
1
Ligand/Ion
SODIUM ION
3
OLA
10
Ligand/Ion
OLEIC ACID
4
OLC
10
Ligand/Ion
(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
5
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
6
ZMA
1
Ligand/Ion
4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]TRIAZOLO[1,5-A][1,3,5]TRIAZIN-5-YL)AMINO]ETHYL}PHENOL
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LEU A:85 , PHE A:168 , GLU A:169 , MET A:177 , TRP A:246 , LEU A:249 , HIS A:250 , ASN A:253 , LEU A:267 , ILE A:274 , HOH A:1332 , HOH A:1335 , HOH A:1341
binding site for residue ZMA A 1201
02
AC2
SOFTWARE
ASP A:52 , SER A:91 , HOH A:1316 , HOH A:1330 , HOH A:1355
binding site for residue NA A 1202
03
AC3
SOFTWARE
ALA A:72 , ALA A:73 , GLY A:76 , ILE A:80 , OLC A:1206 , OLC A:1226
binding site for residue CLR A 1203
04
AC4
SOFTWARE
PRO A:248 , CYS A:262 , SER A:263 , OLC A:1214
binding site for residue CLR A 1204
05
AC5
SOFTWARE
PHE A:255 , PHE A:258 , OLC A:1206 , OLC A:1226 , HOH A:1317
binding site for residue CLR A 1205
06
AC6
SOFTWARE
PHE A:70 , CYS A:71 , CLR A:1203 , CLR A:1205 , OLC A:1211 , OLC A:1214
binding site for residue OLC A 1206
07
AC7
SOFTWARE
HOH A:1314
binding site for residue OLC A 1207
08
AC8
SOFTWARE
VAL A:46 , ARG A:205
binding site for residue OLC A 1208
09
AC9
SOFTWARE
TYR A:43 , LYS A:122 , TRP A:129 , OLA A:1223
binding site for residue OLC A 1209
10
AD1
SOFTWARE
LEU A:141 , TYR A:179 , ALA A:184 , OLA A:1222 , OLA A:1223
binding site for residue OLC A 1210
11
AD2
SOFTWARE
THR A:65 , THR A:68 , OLC A:1206 , OLA A:1218
binding site for residue OLC A 1211
12
AD3
SOFTWARE
SER A:6 , SER A:67 , LEU A:267 , TYR A:271 , OLA A:1216 , HOH A:1302 , HOH A:1348
binding site for residue OLC A 1213
13
AD4
SOFTWARE
PHE A:255 , CLR A:1204 , OLC A:1206
binding site for residue OLC A 1214
14
AD5
SOFTWARE
TRP A:268 , TYR A:290
binding site for residue OLA A 1215
15
AD6
SOFTWARE
TYR A:290 , OLC A:1213
binding site for residue OLA A 1216
16
AD7
SOFTWARE
LEU A:14 , OLC A:1211
binding site for residue OLA A 1218
17
AD8
SOFTWARE
THR A:11
binding site for residue OLA A 1219
18
AD9
SOFTWARE
ILE A:124
binding site for residue OLA A 1220
19
AE1
SOFTWARE
OLC A:1210
binding site for residue OLA A 1222
20
AE2
SOFTWARE
OLC A:1209 , OLC A:1210
binding site for residue OLA A 1223
21
AE3
SOFTWARE
TRP A:29 , TRP A:32 , LYS A:233
binding site for residue OLA A 1224
22
AE4
SOFTWARE
GLY A:123 , ILE A:124
binding site for residue PEG A 1225
23
AE5
SOFTWARE
PHE A:258 , CLR A:1203 , CLR A:1205
binding site for residue OLC A 1226
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (81 KB)
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