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5K1X
Asym. Unit
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Asym.Unit (101 KB)
Biol.Unit 1 (188 KB)
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(1)
Title
:
CATALYTIC DOMAIN OF POLYSPECIFIC PYRROLYSYL-TRNA SYNTHETASE MUTANT Y306A/N346A/C348A/Y384F IN COMPLEX WITH AMPPNP
Authors
:
A. Weber
Date
:
18 May 16 (Deposition) - 19 Oct 16 (Release) - 02 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Protein Engineering, Aminoacyl-Trna Synthetase, Noncanonical Amino Acids, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. J. Lee, M. J. Schmidt, J. M. Tharp, A. Weber, A. L. Koenig, H. Zheng, J. Gao, M. L. Waters, D. Summerer, W. R. Liu
Genetically Encoded Fluorophenylalanines Enable Insights Into The Recognition Of Lysine Trimethylation By An Epigenetic Reader.
Chem. Commun. (Camb. ) V. 52 12606 2016
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Hetero Components
(5, 6)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
2a: CHLORIDE ION (CLa)
3a: 1,2-ETHANEDIOL (EDOa)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
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No.
Name
Count
Type
Full Name
1
ANP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
CL
1
Ligand/Ion
CHLORIDE ION
3
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
4
MG
2
Ligand/Ion
MAGNESIUM ION
5
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:330 , GLU A:332 , HIS A:338 , LEU A:339 , PHE A:342 , MET A:344 , GLU A:396 , LEU A:397 , SER A:398 , SER A:399 , GLY A:421 , GLY A:423 , ARG A:426 , MG A:502 , MG A:503 , HOH A:604 , HOH A:620 , HOH A:636 , HOH A:643 , HOH A:647 , HOH A:651 , HOH A:683 , HOH A:684 , HOH A:696 , HOH A:703 , HOH A:709
binding site for residue ANP A 501
2
AC2
SOFTWARE
GLU A:396 , SER A:399 , ANP A:501 , HOH A:636 , HOH A:651
binding site for residue MG A 502
3
AC3
SOFTWARE
ANP A:501 , HOH A:620 , HOH A:643 , HOH A:647 , HOH A:703
binding site for residue MG A 503
4
AC4
SOFTWARE
TYR A:242 , LYS A:245 , GLU A:249 , LEU A:428 , LYS A:431 , HIS A:432
binding site for residue EDO A 504
5
AC5
SOFTWARE
LEU A:309 , ILE A:413 , TRP A:417 , HOH A:644
binding site for residue PEG A 505
6
AC6
SOFTWARE
MET A:300 , LEU A:301 , ALA A:302 , MET A:344
binding site for residue CL A 506
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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