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5K02
Asym. Unit
Info
Asym.Unit (557 KB)
Biol.Unit 1 (54 KB)
Biol.Unit 10 (54 KB)
Biol.Unit 11 (54 KB)
Biol.Unit 12 (54 KB)
Biol.Unit 2 (54 KB)
Biol.Unit 3 (54 KB)
Biol.Unit 4 (54 KB)
Biol.Unit 5 (54 KB)
Biol.Unit 6 (54 KB)
Biol.Unit 7 (55 KB)
Biol.Unit 8 (54 KB)
Biol.Unit 9 (54 KB)
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(1)
Title
:
STRUCTURE OF HUMAN SOD1 WITH T2D MUTATION
Authors
:
J. M. Fay, C. Zhu, W. Cui, H. Ke, N. V. Dokholyan
Date
:
17 May 16 (Deposition) - 23 Nov 16 (Release) - 23 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,L (1x)
Biol. Unit 3: D,K (1x)
Biol. Unit 4: E,J (1x)
Biol. Unit 5: F,I (1x)
Biol. Unit 6: G,H (1x)
Biol. Unit 7: M,N (1x)
Biol. Unit 8: O,X (1x)
Biol. Unit 9: P,W (1x)
Biol. Unit 10: Q,V (1x)
Biol. Unit 11: R,U (1x)
Biol. Unit 12: S,T (1x)
Keywords
:
Sod1, Phosphomimetic Mutation, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Fay, C. Zhu, E. A. Proctor, Y. Tao, W. Cui, H. Ke, N. V. Dokholyan
A Phosphomimetic Mutation Stabilizes Sod1 And Rescues Cell Viability In The Context Of An Als-Associated Mutation.
Structure V. 24 1898 2016
[
close entry info
]
Hetero Components
(2, 48)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
1e: COPPER (II) ION (CUe)
1f: COPPER (II) ION (CUf)
1g: COPPER (II) ION (CUg)
1h: COPPER (II) ION (CUh)
1i: COPPER (II) ION (CUi)
1j: COPPER (II) ION (CUj)
1k: COPPER (II) ION (CUk)
1l: COPPER (II) ION (CUl)
1m: COPPER (II) ION (CUm)
1n: COPPER (II) ION (CUn)
1o: COPPER (II) ION (CUo)
1p: COPPER (II) ION (CUp)
1q: COPPER (II) ION (CUq)
1r: COPPER (II) ION (CUr)
1s: COPPER (II) ION (CUs)
1t: COPPER (II) ION (CUt)
1u: COPPER (II) ION (CUu)
1v: COPPER (II) ION (CUv)
1w: COPPER (II) ION (CUw)
1x: COPPER (II) ION (CUx)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
2g: ZINC ION (ZNg)
2h: ZINC ION (ZNh)
2i: ZINC ION (ZNi)
2j: ZINC ION (ZNj)
2k: ZINC ION (ZNk)
2l: ZINC ION (ZNl)
2m: ZINC ION (ZNm)
2n: ZINC ION (ZNn)
2o: ZINC ION (ZNo)
2p: ZINC ION (ZNp)
2q: ZINC ION (ZNq)
2r: ZINC ION (ZNr)
2s: ZINC ION (ZNs)
2t: ZINC ION (ZNt)
2u: ZINC ION (ZNu)
2v: ZINC ION (ZNv)
2w: ZINC ION (ZNw)
2x: ZINC ION (ZNx)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CU
24
Ligand/Ion
COPPER (II) ION
2
ZN
24
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
47: AH2 (SOFTWARE)
48: AH3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:46 , HIS A:48 , HIS A:63 , HIS A:120 , HOH A:331
binding site for residue CU A 201
02
AC2
SOFTWARE
HIS A:63 , HIS A:71 , HIS A:80 , ASP A:83 , LYS A:136
binding site for residue ZN A 202
03
AC3
SOFTWARE
HIS B:46 , HIS B:48 , HIS B:63 , HIS B:120 , HOH B:325
binding site for residue CU B 201
04
AC4
SOFTWARE
HIS B:63 , HIS B:71 , HIS B:80 , ASP B:83 , LYS B:136
binding site for residue ZN B 202
05
AC5
SOFTWARE
HIS C:46 , HIS C:48 , HIS C:63 , HIS C:120
binding site for residue CU C 201
06
AC6
SOFTWARE
HIS C:63 , HIS C:71 , HIS C:80 , ASP C:83 , LYS C:136
binding site for residue ZN C 202
07
AC7
SOFTWARE
HIS D:46 , HIS D:48 , HIS D:63 , HIS D:120 , HOH D:333
binding site for residue CU D 201
08
AC8
SOFTWARE
HIS D:63 , HIS D:71 , HIS D:80 , ASP D:83 , LYS D:136
binding site for residue ZN D 202
09
AC9
SOFTWARE
HIS E:46 , HIS E:48 , HIS E:120
binding site for residue CU E 201
10
AD1
SOFTWARE
HIS E:63 , HIS E:71 , HIS E:80 , ASP E:83
binding site for residue ZN E 202
11
AD2
SOFTWARE
HIS F:46 , HIS F:48 , HIS F:63 , HIS F:120 , HOH F:315
binding site for residue CU F 201
12
AD3
SOFTWARE
HIS F:63 , HIS F:71 , HIS F:80 , ASP F:83
binding site for residue ZN F 202
13
AD4
SOFTWARE
HIS G:46 , HIS G:48 , HIS G:63 , HIS G:120
binding site for residue CU G 201
14
AD5
SOFTWARE
HIS G:63 , HIS G:71 , HIS G:80 , ASP G:83
binding site for residue ZN G 202
15
AD6
SOFTWARE
HIS H:46 , HIS H:48 , HIS H:63 , HIS H:120 , HOH H:305
binding site for residue CU H 201
16
AD7
SOFTWARE
HIS H:63 , HIS H:71 , HIS H:80 , ASP H:83
binding site for residue ZN H 202
17
AD8
SOFTWARE
HIS I:46 , HIS I:48 , HIS I:63 , HIS I:120
binding site for residue CU I 201
18
AD9
SOFTWARE
HIS I:63 , HIS I:71 , HIS I:80 , ASP I:83
binding site for residue ZN I 202
19
AE1
SOFTWARE
HIS J:46 , HIS J:48 , HIS J:120
binding site for residue CU J 201
20
AE2
SOFTWARE
HIS J:63 , HIS J:71 , HIS J:80 , ASP J:83
binding site for residue ZN J 202
21
AE3
SOFTWARE
HIS K:46 , HIS K:48 , HIS K:63 , HIS K:120
binding site for residue CU K 201
22
AE4
SOFTWARE
HIS K:63 , HIS K:71 , HIS K:80 , ASP K:83
binding site for residue ZN K 202
23
AE5
SOFTWARE
HIS L:46 , HIS L:48 , HIS L:63 , HIS L:120 , HOH L:301 , HOH L:303
binding site for residue CU L 201
24
AE6
SOFTWARE
HIS L:63 , HIS L:71 , HIS L:80 , ASP L:83 , LYS L:136
binding site for residue ZN L 202
25
AE7
SOFTWARE
HIS M:46 , HIS M:48 , HIS M:63 , HIS M:120
binding site for residue CU M 201
26
AE8
SOFTWARE
HIS M:63 , HIS M:71 , HIS M:80 , ASP M:83
binding site for residue ZN M 202
27
AE9
SOFTWARE
HIS N:46 , HIS N:48 , HIS N:63 , HIS N:120
binding site for residue CU N 201
28
AF1
SOFTWARE
HIS N:63 , HIS N:71 , HIS N:80 , ASP N:83
binding site for residue ZN N 202
29
AF2
SOFTWARE
HIS O:46 , HIS O:48 , HIS O:63 , HIS O:120
binding site for residue CU O 201
30
AF3
SOFTWARE
HIS O:63 , HIS O:71 , HIS O:80 , ASP O:83
binding site for residue ZN O 202
31
AF4
SOFTWARE
HIS P:46 , HIS P:48 , HIS P:63 , HIS P:120
binding site for residue CU P 201
32
AF5
SOFTWARE
HIS P:63 , HIS P:71 , HIS P:80 , ASP P:83
binding site for residue ZN P 202
33
AF6
SOFTWARE
HIS Q:46 , HIS Q:48 , HIS Q:63 , HIS Q:120
binding site for residue CU Q 201
34
AF7
SOFTWARE
HIS Q:63 , HIS Q:71 , HIS Q:80 , ASP Q:83 , LYS Q:136
binding site for residue ZN Q 202
35
AF8
SOFTWARE
HIS R:46 , HIS R:48 , HIS R:63 , HIS R:120
binding site for residue CU R 201
36
AF9
SOFTWARE
HIS R:63 , HIS R:71 , HIS R:80 , ASP R:83
binding site for residue ZN R 202
37
AG1
SOFTWARE
HIS S:46 , HIS S:48 , HIS S:63 , HIS S:120 , HOH S:314
binding site for residue CU S 201
38
AG2
SOFTWARE
HIS S:63 , HIS S:71 , HIS S:80 , ASP S:83 , LYS S:136
binding site for residue ZN S 202
39
AG3
SOFTWARE
HIS T:46 , HIS T:48 , HIS T:63 , HIS T:120
binding site for residue CU T 201
40
AG4
SOFTWARE
HIS T:63 , HIS T:71 , HIS T:80 , ASP T:83 , LYS T:136
binding site for residue ZN T 202
41
AG5
SOFTWARE
HIS U:46 , HIS U:48 , HIS U:63 , HIS U:120
binding site for residue CU U 201
42
AG6
SOFTWARE
HIS U:63 , HIS U:71 , HIS U:80 , ASP U:83 , LYS U:136
binding site for residue ZN U 202
43
AG7
SOFTWARE
HIS V:46 , HIS V:48 , HIS V:63 , HIS V:120
binding site for residue CU V 201
44
AG8
SOFTWARE
HIS V:63 , HIS V:71 , HIS V:80 , ASP V:83
binding site for residue ZN V 202
45
AG9
SOFTWARE
HIS W:46 , HIS W:48 , HIS W:63 , HIS W:120
binding site for residue CU W 201
46
AH1
SOFTWARE
HIS W:63 , HIS W:71 , HIS W:80 , ASP W:83
binding site for residue ZN W 202
47
AH2
SOFTWARE
HIS X:46 , HIS X:48 , HIS X:63 , HIS X:120
binding site for residue CU X 201
48
AH3
SOFTWARE
HIS X:63 , HIS X:71 , HIS X:80 , ASP X:83
binding site for residue ZN X 202
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
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Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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Atom Selection
(currently selected atoms:
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Chain J
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Asym.Unit (557 KB)
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Biol.Unit 11 (54 KB)
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Biol.Unit 12 (54 KB)
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