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5JLV
Biol. Unit 2
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Asym.Unit (393 KB)
Biol.Unit 1 (195 KB)
Biol.Unit 2 (192 KB)
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(1)
Title
:
RECEPTOR BINDING DOMAIN OF BOTULINUM NEUROTOXIN A IN COMPLEX WITH HUMAN GLYCOSYLATED SV2C
Authors
:
G. Yao, S. Zhang, S. Mahrhold, K. Lam, D. Stern, K. Bagramyan, K. Perry, M A. Rummel, M. Dong, R. Jin
Date
:
27 Apr 16 (Deposition) - 15 Jun 16 (Release) - 03 Aug 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Glycosylation, Botulinum Neurotoxin, Receptor Binding Domain, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
G. Yao, S. Zhang, S. Mahrhold, K. H. Lam, D. Stern, K. Bagramyan, K. Perry, M. Kalkum, A. Rummel, M. Dong, R. Jin
N-Linked Glycosylation Of Sv2 Is Required For Binding And Uptake Of Botulinum Neurotoxin A.
Nat. Struct. Mol. Biol. V. 23 656 2016
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Hetero Components
(4, 6)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
2a: BETA-D-MANNOSE (BMAa)
3a: ALPHA-L-FUCOSE (FUCa)
3b: ALPHA-L-FUCOSE (FUCb)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5a: PHOSPHATE ION (PO4a)
5b: PHOSPHATE ION (PO4b)
5c: PHOSPHATE ION (PO4c)
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No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
BMA
-1
Ligand/Ion
BETA-D-MANNOSE
3
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
4
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
PO4
1
Ligand/Ion
PHOSPHATE ION
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Sites
(4, 4)
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All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC6 (SOFTWARE)
4: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
ARG B:1276 , GLU C:470 , GLY C:471 , ARG C:472
binding site for residue ACT B 1301
2
AC5
SOFTWARE
MET B:1144
binding site for residue ACT B 1302
3
AC6
SOFTWARE
GLU B:982 , ARG B:996 , VAL B:998
binding site for residue PO4 B 1303
4
AC9
SOFTWARE
HIS B:1064 , ASP B:1289 , GLY B:1292 , HOH B:1433 , HOH B:1485 , ILE D:538 , ASP D:539 , LYS D:558 , ASN D:559 , HOH D:701 , HOH D:705 , HOH D:709
binding site for Poly-Saccharide residues FUC D 601 through NAG D 603 bound to ASN D 559
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Asymmetric Unit 1
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Asym.Unit (393 KB)
Header - Asym.Unit
Biol.Unit 1 (195 KB)
Header - Biol.Unit 1
Biol.Unit 2 (192 KB)
Header - Biol.Unit 2
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