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5JEZ
Asym. Unit
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Asym.Unit (81 KB)
Biol.Unit 1 (74 KB)
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Title
:
CRYSTAL STRUCTURE OF TYPE 2 PDF FROM STREPTOCOCCUS AGALACTIAE IN COMPLEX WITH TRIPEPTIDE MET-ALA-SER
Authors
:
S. Fieulaine, C. Giglione, T. Meinnel
Date
:
19 Apr 16 (Deposition) - 30 Nov 16 (Release) - 30 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,D
Biol. Unit 1: A,D (1x)
Keywords
:
Pdf, Type 2, Nme, N-Terminal Methionine Excision, Streptococcus Agalactiae, Inhibitor, Tripeptide, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
S. Fieulaine, R. Alves De Sousa, L. Maigre, K. Hamiche, M. Alimi, J. M. Bolla, A. Taleb, A. Denis, J. M. Pages, I. Artaud, T. Meinnel, C. Giglione
A Unique Peptide Deformylase Platform To Rationally Design And Challenge Novel Active Compounds.
Sci Rep V. 6 35429 2016
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: CYSTEINESULFONIC ACID (OCSa)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
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No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
OCS
1
Mod. Amino Acid
CYSTEINESULFONIC ACID
3
ZN
8
Ligand/Ion
ZINC ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:145 , GLU A:158 , ASP A:177 , ARG A:187 , ZN A:306 , HOH A:444 , HOH A:472 , HOH A:618
binding site for residue ACT A 301
2
AC2
SOFTWARE
GLN A:77 , OCS A:131 , HIS A:174 , HIS A:178 , HOH A:447 , HOH A:620
binding site for residue ZN A 302
3
AC3
SOFTWARE
HIS A:55 , GLU A:198 , HOH A:488 , HOH A:557 , HOH A:642
binding site for residue ZN A 303
4
AC4
SOFTWARE
HIS A:118 , ASP A:154 , HOH A:421 , HOH A:622 , HOH A:624 , HOH A:644 , HOH A:654
binding site for residue ZN A 304
5
AC5
SOFTWARE
ASP A:94 , GLU A:190 , HOH A:484 , HOH A:527 , HOH A:556
binding site for residue ZN A 305
6
AC6
SOFTWARE
HIS A:145 , GLU A:158 , ACT A:301 , HOH A:627
binding site for residue ZN A 306
7
AC7
SOFTWARE
HIS A:12 , ASP A:18 , HOH A:418 , HOH A:424 , HOH A:436 , HOH A:626
binding site for residue ZN A 307
8
AC8
SOFTWARE
GLU A:43 , GLU A:47 , HOH A:525
binding site for residue ZN A 308
9
AC9
SOFTWARE
GLU A:102 , GLU A:151 , HOH A:582 , HOH A:617 , HOH A:636 , HOH A:641
binding site for residue ZN A 309
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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