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5J5I
Biol. Unit 1
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Asym.Unit (380 KB)
Biol.Unit 1 (189 KB)
Biol.Unit 2 (187 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) IN COMPLEX WITH 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)METHYL]AMINO}PYRIMIDIN-4-YL)PHENOL
Authors
:
K. Kaczanowska, M. Harel, G. A. Camacho Hernandez, P. Taylor
Date
:
02 Apr 16 (Deposition) - 08 Mar 17 (Release) - 22 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.33
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Acetylcholine-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Kaczanowska, G. A. Camacho Hernandez, L. Bendiks, L. Kohs, J. M. Cornejo-Bravo, M. Harel, M. G. Finn, P. Taylor
Substituted 2-Aminopyrimidines Selective For Alpha 7-Nicotinic Acetylcholine Receptor Activation And Association With Acetylcholine Binding Proteins.
J. Am. Chem. Soc. V. 139 3676 2017
[
close entry info
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Hetero Components
(3, 20)
Info
All Hetero Components
1a: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMa)
1b: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMb)
1c: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMc)
1d: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMd)
1e: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMe)
1f: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMf)
1g: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMg)
1h: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMh)
1i: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMi)
1j: 4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)ME... (6GMj)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
2h: N-ACETYL-D-GLUCOSAMINE (NAGh)
2i: N-ACETYL-D-GLUCOSAMINE (NAGi)
2j: N-ACETYL-D-GLUCOSAMINE (NAGj)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
3c: PHOSPHATE ION (PO4c)
3d: PHOSPHATE ION (PO4d)
3e: PHOSPHATE ION (PO4e)
3f: PHOSPHATE ION (PO4f)
3g: PHOSPHATE ION (PO4g)
3h: PHOSPHATE ION (PO4h)
3i: PHOSPHATE ION (PO4i)
3j: PHOSPHATE ION (PO4j)
3k: PHOSPHATE ION (PO4k)
3l: PHOSPHATE ION (PO4l)
3m: PHOSPHATE ION (PO4m)
3n: PHOSPHATE ION (PO4n)
3o: PHOSPHATE ION (PO4o)
3p: PHOSPHATE ION (PO4p)
3q: PHOSPHATE ION (PO4q)
3r: PHOSPHATE ION (PO4r)
3s: PHOSPHATE ION (PO4s)
3t: PHOSPHATE ION (PO4t)
3u: PHOSPHATE ION (PO4u)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
6GM
5
Ligand/Ion
4-(2-AMINO-6-{BIS[(PYRIDIN-2-YL)METHYL]AMINO}PYRIMIDIN-4-YL)PHENOL
2
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
PO4
10
Ligand/Ion
PHOSPHATE ION
[
close Hetero Component info
]
Sites
(30, 30)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AE2 (SOFTWARE)
17: AE4 (SOFTWARE)
18: AE7 (SOFTWARE)
19: AF2 (SOFTWARE)
20: AF4 (SOFTWARE)
21: AF5 (SOFTWARE)
22: AF6 (SOFTWARE)
23: AF7 (SOFTWARE)
24: AF8 (SOFTWARE)
25: AF9 (SOFTWARE)
26: AG1 (SOFTWARE)
27: AG2 (SOFTWARE)
28: AG3 (SOFTWARE)
29: AG4 (SOFTWARE)
30: AG5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:143 , TYR A:185 , CYS A:187 , CYS A:188 , TYR A:192 , GLN B:55 , THR B:57 , ARG B:104 , LEU B:112 , MET B:114 , TYR B:164
binding site for residue 6GM A 302
02
AC2
SOFTWARE
GLN A:55 , THR A:56 , THR A:57 , ARG A:104 , LEU A:112 , MET A:114 , TYR A:164 , TRP E:143 , TYR E:185 , CYS E:187 , CYS E:188 , TYR E:192
binding site for residue 6GM A 303
03
AC3
SOFTWARE
ARG A:3 , VAL A:74 , SER A:75 , ASP E:17 , VAL E:18 , ILE E:19 , HIS E:145 , HOH E:438
binding site for residue PO4 A 304
04
AC4
SOFTWARE
TRP B:143 , TYR B:185 , CYS B:187 , CYS B:188 , TYR B:192 , GLN C:55 , THR C:56 , THR C:57 , ARG C:104 , LEU C:112 , MET C:114 , TYR C:164
binding site for residue 6GM B 302
05
AC5
SOFTWARE
ASP A:17 , VAL A:18 , ILE A:19 , HIS A:145 , ARG B:3 , VAL B:74 , SER B:75
binding site for residue PO4 B 303
06
AC6
SOFTWARE
TRP C:143 , TYR C:185 , CYS C:187 , CYS C:188 , TYR C:192 , GLN D:55 , THR D:57 , ARG D:104 , LEU D:112 , MET D:114 , TYR D:164
binding site for residue 6GM C 302
07
AC7
SOFTWARE
ASP B:17 , VAL B:18 , ILE B:19 , HIS B:145 , ARG C:3 , VAL C:74 , SER C:75
binding site for residue PO4 C 303
08
AC8
SOFTWARE
SER C:162 , GLU C:163 , TYR C:164 , PHE C:165 , GLN C:167
binding site for residue PO4 C 304
09
AC9
SOFTWARE
ASP D:17 , VAL D:18 , ILE D:19 , HIS D:145 , ARG E:3 , SER E:75
binding site for residue PO4 D 302
10
AD1
SOFTWARE
ASP C:17 , VAL C:18 , ILE C:19 , HIS C:145 , ARG D:3 , VAL D:74 , SER D:75
binding site for residue PO4 D 303
11
AD2
SOFTWARE
GLU D:131 , ARG D:202 , HOH D:402 , HOH D:404
binding site for residue PO4 D 304
12
AD3
SOFTWARE
ASP D:-7 , ASP D:-4 , HIS D:69 , NAG I:301
binding site for residue PO4 D 305
13
AD4
SOFTWARE
TYR D:89 , TRP D:143 , TYR D:185 , CYS D:187 , CYS D:188 , TYR D:192 , GLN E:55 , THR E:56 , THR E:57 , ARG E:104 , LEU E:112 , MET E:114 , TYR E:164 , HOH E:408
binding site for residue 6GM E 302
14
AD5
SOFTWARE
VAL E:41 , ASP E:129 , LYS E:203
binding site for residue PO4 E 303
15
AD6
SOFTWARE
ASP E:-4 , ASP E:-7 , HIS E:69 , NAG H:301
binding site for residue PO4 E 304
16
AE2
SOFTWARE
NAG B:301 , ASP F:-4 , ASP F:-7 , HIS F:69
binding site for residue PO4 F 306
17
AE4
SOFTWARE
NAG A:301 , LYS G:-5 , ASP G:-7 , ASP G:-4 , HIS G:69
binding site for residue PO4 G 303
18
AE7
SOFTWARE
NAG E:301 , ASP H:-4 , ASP H:-7 , LYS H:-5 , HIS H:69
binding site for residue PO4 H 304
19
AF2
SOFTWARE
NAG D:301 , ASP I:-4 , ASP I:-7 , HIS I:69
binding site for residue PO4 I 305
20
AF4
SOFTWARE
NAG C:301 , SER E:162 , ASP J:-4 , ASP J:-7 , HIS J:69 , HOH J:403
binding site for residue PO4 J 303
21
AF5
SOFTWARE
ASN A:66 , SER A:68 , HOH A:413 , ASP G:-1 , ASP G:2 , HIS G:69 , PO4 G:303
binding site for Mono-Saccharide NAG A 301 bound to ASN A 66
22
AF6
SOFTWARE
ASN B:66 , SER B:68 , ASP F:-4 , PO4 F:306
binding site for Mono-Saccharide NAG B 301 bound to ASN B 66
23
AF7
SOFTWARE
ASN C:66 , SER C:68 , ASP J:-4 , PO4 J:303
binding site for Mono-Saccharide NAG C 301 bound to ASN C 66
24
AF8
SOFTWARE
ASN D:66 , SER D:68 , HIS D:69 , HOH D:421 , ASP I:-4 , HIS I:69 , PO4 I:305
binding site for Mono-Saccharide NAG D 301 bound to ASN D 66
25
AF9
SOFTWARE
ASN E:66 , SER E:68 , HIS H:69 , PO4 H:304
binding site for Mono-Saccharide NAG E 301 bound to ASN E 66
26
AG1
SOFTWARE
LYS B:-5 , ASN F:66 , SER F:68 , HIS F:69
binding site for Mono-Saccharide NAG F 301 bound to ASN F 66
27
AG2
SOFTWARE
ASP A:-4 , HIS A:69 , ASN G:66 , SER G:68
binding site for Mono-Saccharide NAG G 301 bound to ASN G 66
28
AG3
SOFTWARE
ASP E:-1 , ASP E:-4 , ASP E:2 , HIS E:69 , PO4 E:304 , ASN H:66 , SER H:68 , HIS H:69
binding site for Mono-Saccharide NAG H 301 bound to ASN H 66
29
AG4
SOFTWARE
ASP D:-4 , PO4 D:305 , ASN I:66 , SER I:68
binding site for Mono-Saccharide NAG I 301 bound to ASN I 66
30
AG5
SOFTWARE
LEU E:174 , ASP E:175 , ASN E:200 , ASN J:66 , SER J:68 , HIS J:69
binding site for Mono-Saccharide NAG J 301 bound to ASN J 66
[
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(0, 0)
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Pfam Domains
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