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5ITC
Asym. Unit
Info
Asym.Unit (236 KB)
Biol.Unit 1 (227 KB)
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(1)
Title
:
2.2-ANGSTROM IN MESO CRYSTAL STRUCTURE OF HALOQUADRATUM WALSBYI BACTERIORHODOPSIN (HWBR) FROM STYRENE MALEIC ACID (SMA) POLYMER NANODISCS
Authors
:
J. Broecker, B. T. Eger, O. P. Ernst
Date
:
16 Mar 16 (Deposition) - 25 Jan 17 (Release) - 22 Feb 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Bacteriorhodopsin From Haloquadratum Walsbyi, Lipidic Cubic Phase, Styrene Maleic Acid (Sma) Polymer Nanodisc, Detergent-Free, Membrane Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Broecker, B. T. Eger, O. P. Ernst
Crystallogenesis Of Membrane Proteins Mediated By Polymer-Bounded Lipid Nanodiscs.
Structure V. 25 384 2017
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBa)
1b: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBb)
1c: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBc)
1d: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBd)
1e: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBe)
1f: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBf)
1g: (2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLBg)
2a: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCa)
2b: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCb)
2c: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCc)
3a: RETINAL (RETa)
3b: RETINAL (RETb)
3c: RETINAL (RETc)
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No.
Name
Count
Type
Full Name
1
OLB
7
Ligand/Ion
(2S)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
2
OLC
3
Ligand/Ion
(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
3
RET
3
Ligand/Ion
RETINAL
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
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Residues
Description
01
AC1
SOFTWARE
TYR A:91 , TRP A:94 , THR A:97 , THR A:98 , SER A:149 , THR A:150 , TRP A:190 , TYR A:193 , ASP A:220 , LYS A:224
binding site for residue RET A 301
02
AC2
SOFTWARE
ILE A:35 , GLY A:38 , LYS A:47 , TYR A:50 , ILE A:54 , ALA A:58 , ILE B:122 , PHE B:155
binding site for residue OLC A 302
03
AC3
SOFTWARE
LEU A:95 , PRO A:99 , LEU A:103 , LEU A:107 , ALA A:111 , OLB A:305 , PHE C:96
binding site for residue OLB A 303
04
AC4
SOFTWARE
THR A:150 , MET A:153 , TYR A:158
binding site for residue OLC A 304
05
AC5
SOFTWARE
GLU A:48 , LEU A:55 , SER A:63 , LEU A:100 , OLB A:303 , GLN B:113 , GLY B:117 , ALA B:124 , PHE B:125 , VAL B:128 , HOH B:420
binding site for residue OLB A 305
06
AC6
SOFTWARE
PHE A:96 , LEU B:95 , PRO B:99 , LEU B:103 , VAL B:128
binding site for residue OLB A 306
07
AC7
SOFTWARE
MET B:153 , TYR B:158 , VAL B:161 , ALA B:162 , VAL B:195
binding site for residue OLB B 302
08
AC8
SOFTWARE
ILE B:35 , GLY B:38 , LEU B:39 , LYS B:47 , VAL B:51 , ILE B:54 , ALA B:61 , PHE C:155
binding site for residue OLB B 303
09
AC9
SOFTWARE
GLN A:113 , GLY A:117 , GLY A:121 , VAL A:128 , HOH A:423 , GLU C:48 , LEU C:55 , ILE C:59 , PHE C:96
binding site for residue OLB C 302
10
AD1
SOFTWARE
PRO B:44 , LYS B:47 , GLU B:48 , VAL B:51 , SER B:63 , PHE B:96 , ARG C:114 , ASP C:115 , GLY C:117 , ALA C:118 , GLY C:121 , ALA C:124 , PHE C:125 , VAL C:128 , TYR C:159
binding site for residue OLC C 303
11
AD2
SOFTWARE
PHE A:125 , SER A:152 , PHE A:155 , MET C:31 , ILE C:35 , GLY C:38 , LEU C:39 , LYS C:47 , ILE C:54 , HOH C:407
binding site for residue OLB C 304
12
AD3
SOFTWARE
ILE B:56 , ALA B:60 , ASP B:93 , TRP B:94 , THR B:97 , THR B:98 , MET B:126 , TRP B:146 , SER B:149 , THR B:150 , TRP B:190 , TYR B:193 , ASP B:220 , LEU B:221 , VAL B:222 , ALA B:223 , VAL B:225 , GLY B:226 , GLY B:228 , HOH B:409
binding site for Di-peptide RET B 301 and LYS B 224
13
AD4
SOFTWARE
ILE C:56 , ALA C:60 , ASP C:93 , TRP C:94 , THR C:97 , THR C:98 , MET C:126 , SER C:149 , THR C:150 , TRP C:190 , TYR C:193 , ASP C:220 , LEU C:221 , VAL C:222 , ALA C:223 , VAL C:225 , GLY C:226 , GLY C:228 , HOH C:412
binding site for Di-peptide RET C 301 and LYS C 224
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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