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5IK5
Biol. Unit 1
Info
Asym.Unit (231 KB)
Biol.Unit 1 (223 KB)
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(1)
Title
:
LAMININ A2LG45 C-FORM, G6/7 BOUND.
Authors
:
D. C. Briggs, E. Hohenester, K. P. Campbell
Date
:
03 Mar 16 (Deposition) - 10 Aug 16 (Release) - 28 Sep 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.39
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Extracellular Matrix, Ligand Binding, Lg Domain, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. C. Briggs, T. Yoshida-Moriguchi, T. Zheng, D. Venzke, M. E. Anderson, A. Strazzulli, M. Moracci, L. Yu, E. Hohenester, K. P. Campbell
Structural Basis Of Laminin Binding To The Large Glycans On Dystroglycan.
Nat. Chem. Biol. V. 12 810 2016
[
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Hetero Components
(7, 15)
Info
All Hetero Components
1a: 7-HYDROXY-4-METHYL-2H-CHROMEN-2-ON... (4MUa)
2a: N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE (A2Ga)
3a: BETA-D-GLUCOPYRANURONIC ACID (BDPa)
3b: BETA-D-GLUCOPYRANURONIC ACID (BDPb)
4a: CALCIUM ION (CAa)
4b: CALCIUM ION (CAb)
5a: BETA-D-GALACTOSE (GALa)
6a: GLYCEROL (GOLa)
6b: GLYCEROL (GOLb)
6c: GLYCEROL (GOLc)
6d: GLYCEROL (GOLd)
6e: GLYCEROL (GOLe)
6f: GLYCEROL (GOLf)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
8a: XYLOPYRANOSE (XYSa)
8b: XYLOPYRANOSE (XYSb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
4MU
1
Ligand/Ion
7-HYDROXY-4-METHYL-2H-CHROMEN-2-ONE
2
A2G
1
Ligand/Ion
N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
3
BDP
2
Ligand/Ion
BETA-D-GLUCOPYRANURONIC ACID
4
CA
-1
Ligand/Ion
CALCIUM ION
5
GAL
1
Ligand/Ion
BETA-D-GALACTOSE
6
GOL
6
Ligand/Ion
GLYCEROL
7
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
8
XYS
2
Ligand/Ion
XYLOPYRANOSE
[
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:2808 , LEU A:2825 , ILE A:2874 , ASP A:2876 , XYS A:4015 , BDP A:4016 , HOH A:4149 , HOH A:4445
binding site for residue CA A 4001
02
AC2
SOFTWARE
ASP A:2861 , ASP A:2982 , ASN A:2999 , SER A:3053 , ASP A:3055 , HOH A:4441
binding site for residue CA A 4002
03
AC3
SOFTWARE
ARG A:2815 , SER A:2831 , ILE A:2895 , GLY A:2896 , PRO A:3013 , HOH A:4171 , HOH A:4193 , HOH A:4439
binding site for residue GOL A 4007
04
AC4
SOFTWARE
PRO A:2835 , SER A:2863 , ASP A:2998 , GLY A:3002 , ARG A:3003 , HOH A:4106 , HOH A:4121 , HOH A:4237
binding site for residue GOL A 4008
05
AC5
SOFTWARE
VAL A:2851 , GLU A:2854 , PRO A:3047 , HOH A:4114 , HOH A:4240 , HOH A:4243 , HOH A:4340 , HOH A:4353
binding site for residue GOL A 4009
06
AC6
SOFTWARE
ARG A:2766 , ASN A:2767 , THR A:2899 , TYR A:2900 , HOH A:4104 , HOH A:4105
binding site for residue GOL A 4010
07
AC7
SOFTWARE
ARG A:2893 , ALA A:3010 , HIS A:3015 , HOH A:4133 , HOH A:4138 , HOH A:4338 , HOH A:4343
binding site for residue GOL A 4011
08
AC8
SOFTWARE
TYR A:3008 , ASP A:3009 , VAL A:3042
binding site for residue GOL A 4012
09
AC9
SOFTWARE
THR A:2741 , ALA A:2749
binding site for Poly-Saccharide residues A2G A 4003 through GAL A 4004 bound to THR A 2741
10
AD1
SOFTWARE
ILE A:2888 , ASN A:2889
binding site for Poly-Saccharide residues NAG A 4005 through NAG A 4006 bound to ASN A 2889
11
AD2
SOFTWARE
LYS A:2780 , ARG A:2803 , ASP A:2808 , LEU A:2825 , GLY A:2826 , SER A:2827 , LYS A:2870 , ALA A:2872 , ASP A:2873 , ILE A:2874 , ASP A:2876 , CA A:4001 , HOH A:4123 , HOH A:4149 , HOH A:4246 , HOH A:4254 , HOH A:4304 , HOH A:4445
binding site for Poly-Saccharide residues 4MU A 4013 through XYS A 4017
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (231 KB)
Header - Asym.Unit
Biol.Unit 1 (223 KB)
Header - Biol.Unit 1
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