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5IAU
Asym. Unit
Info
Asym.Unit (428 KB)
Biol.Unit 1 (88 KB)
Biol.Unit 2 (88 KB)
Biol.Unit 3 (90 KB)
Biol.Unit 4 (89 KB)
Biol.Unit 5 (90 KB)
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(1)
Title
:
A C69-FAMILY CYSTEINE DIPEPTIDASE FROM LACTOBACILLUS FARCIMINIS
Authors
:
R. Kono, K. Watanabe
Date
:
21 Feb 16 (Deposition) - 01 Mar 17 (Release) - 01 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.78
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Keywords
:
C69 Family, Cysteine Dipeptidase, Ntn Hydrolase, Lactobacillus Farciminis, Gly-Pro, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Kono, K. Watanabe
A C69-Family Cysteine Dipeptidase From Lactobacillus Farciminis; Substrate Recognition Mechanism And Autoproteolytic Mechanism In Enzyme Maturation
To Be Published
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Hetero Components
(1, 16)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EDO
16
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:300 , ASP A:391 , TYR A:392 , ASP A:393 , HOH A:607 , HOH A:670 , HOH A:732
binding site for residue EDO A 501
02
AC2
SOFTWARE
GLY A:451 , ASP A:452 , THR A:455 , HOH A:623 , HOH A:752 , HOH A:856 , GLY D:370 , TRP D:379
binding site for residue EDO A 502
03
AC3
SOFTWARE
ASP B:37 , ASN B:76 , ASN B:81 , TRP B:84 , HOH B:614
binding site for residue EDO B 501
04
AC4
SOFTWARE
GLY B:370 , TRP B:379 , GLY B:451 , ASP B:452 , THR B:455 , HOH B:668 , HOH B:764
binding site for residue EDO B 502
05
AC5
SOFTWARE
ASP A:199 , HOH A:602 , ASP B:184 , HIS B:274
binding site for residue EDO B 503
06
AC6
SOFTWARE
TYR B:300 , ASP B:391 , TYR B:392 , ASP B:393 , HOH B:791
binding site for residue EDO B 504
07
AC7
SOFTWARE
ARG B:107 , ARG B:230 , HIS B:231 , GLY B:234 , SER B:235 , ALA B:236 , HOH B:639 , HOH D:1083
binding site for residue EDO B 505
08
AC8
SOFTWARE
ASP C:199 , PHE C:200 , ASP C:201 , LYS C:212 , TYR C:227
binding site for residue EDO C 501
09
AC9
SOFTWARE
TYR C:300 , ASP C:391 , TYR C:392 , ASP C:393 , HOH C:709
binding site for residue EDO C 502
10
AD1
SOFTWARE
GLY C:451 , ASP C:452 , THR C:455 , HOH C:657 , HOH C:874 , GLY E:370 , TRP E:379
binding site for residue EDO C 503
11
AD2
SOFTWARE
PRO C:50 , ARG C:51 , ASP C:52 , HOH C:892 , HOH C:988
binding site for residue EDO C 504
12
AD3
SOFTWARE
TYR D:300 , ASP D:391 , TYR D:392 , ASP D:393 , HOH D:603 , HOH D:727
binding site for residue EDO D 501
13
AD4
SOFTWARE
TYR E:300 , ASP E:391 , TYR E:392 , ASP E:393 , HOH E:609 , HOH E:774
binding site for residue EDO E 501
14
AD5
SOFTWARE
GLY C:370 , TRP C:379 , GLY E:451 , ASP E:452 , THR E:455 , HOH E:615 , HOH E:877 , HOH E:893
binding site for residue EDO E 502
15
AD6
SOFTWARE
VAL E:179 , GLN E:197 , PHE E:198 , ASP E:199 , THR E:205 , HOH E:647 , HOH E:723 , HOH E:961
binding site for residue EDO E 503
16
AD7
SOFTWARE
ARG E:107 , ARG E:230 , HIS E:231 , GLY E:234 , SER E:235 , ALA E:236 , HOH E:720
binding site for residue EDO E 504
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (428 KB)
Header - Asym.Unit
Biol.Unit 1 (88 KB)
Header - Biol.Unit 1
Biol.Unit 2 (88 KB)
Header - Biol.Unit 2
Biol.Unit 3 (90 KB)
Header - Biol.Unit 3
Biol.Unit 4 (89 KB)
Header - Biol.Unit 4
Biol.Unit 5 (90 KB)
Header - Biol.Unit 5
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