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5HQO
Biol. Unit 1
Info
Asym.Unit (40 KB)
Biol.Unit 1 (723 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF IRCP*/I-PD(ALLYL)-APO-RHLFR
Authors
:
B. Maity, K. Fukumori, S. Abe, T. Ueno
Date
:
21 Jan 16 (Deposition) - 20 Apr 16 (Release) - 20 Apr 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.81
Chains
:
Asym. Unit : A
Biol. Unit 1: A (24x)
Keywords
:
Iron Storage, Metal Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Maity, K. Fukumori, S. Abe, T. Ueno
Immobilization Of Two Organometallic Complexes Into A Singl Cage To Construct Protein-Based Microcompartments
Chem. Commun. (Camb. ) V. 52 5463 2016
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Hetero Components
(3, 96)
Info
All Hetero Components
1a: CADMIUM ION (CDa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
3a: IRIDIUM ION (IRa)
3b: IRIDIUM ION (IRb)
3c: IRIDIUM ION (IRc)
3d: IRIDIUM ION (IRd)
3e: IRIDIUM ION (IRe)
3f: IRIDIUM ION (IRf)
4a: PALLADIUM ION (PDa)
4b: PALLADIUM ION (PDb)
5a: PALLADIUM(II) ALLYL COMPLEX (PLLa)
6a: SULFATE ION (SO4a)
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Label:
No.
Name
Count
Type
Full Name
1
CD
-1
Ligand/Ion
CADMIUM ION
2
EDO
48
Ligand/Ion
1,2-ETHANEDIOL
3
IR
-1
Ligand/Ion
IRIDIUM ION
4
PD
-1
Ligand/Ion
PALLADIUM ION
5
PLL
24
Ligand/Ion
PALLADIUM(II) ALLYL COMPLEX
6
SO4
24
Ligand/Ion
SULFATE ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:114 , CYS A:126 , IR A:204
binding site for residue PD A 201
02
AC2
SOFTWARE
CYS A:48 , HIS A:49 , ARG A:52 , PLL A:203
binding site for residue PD A 202
03
AC3
SOFTWARE
ASP A:38 , GLU A:45 , CYS A:48 , PD A:202
binding site for residue PLL A 203
04
AC4
SOFTWARE
HIS A:114 , CYS A:126 , PD A:201
binding site for residue IR A 204
05
AC5
SOFTWARE
PHE A:128
binding site for residue IR A 205
06
AC6
SOFTWARE
HIS A:49 , IR A:208 , IR A:209
binding site for residue IR A 207
07
AC7
SOFTWARE
HIS A:49 , IR A:207 , IR A:209
binding site for residue IR A 208
08
AC8
SOFTWARE
HIS A:49 , IR A:207 , IR A:208
binding site for residue IR A 209
09
AC9
SOFTWARE
ASP A:80
binding site for residue CD A 210
10
AD1
SOFTWARE
GLN A:6 , ASN A:7 , HOH A:338
binding site for residue SO4 A 211
11
AD2
SOFTWARE
GLU A:11 , ARG A:18 , HOH A:308
binding site for residue EDO A 212
12
AD3
SOFTWARE
LYS A:104 , SER A:105 , HOH A:345 , HOH A:377
binding site for residue EDO A 213
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Chain A
Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
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