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Asym. Unit
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Asym.Unit (51 KB)
Biol.Unit 1 (46 KB)
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Title
:
COMMENT ON S. W. M. TANLEY AND J. R. HELLIWELL STRUCTURAL DYNAMICS OF CISPLATIN BINDING TO HISTIDINE IN A PROTEIN STRUCT. DYN. 1, 034701 (2014) REGARDING THE REFINEMENT OF 4MWK, 4MWM, 4MWN AND 4OXE AND THE METHOD WE HAVE ADOPTED.
Authors
:
J. R. Helliwell
Date
:
21 Jan 16 (Deposition) - 18 May 16 (Release) - 27 Jul 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Structural Dynamics, Cisplatin, Histidine, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. W. Tanley, J. R. Helliwell
Comment On "Structural Dynamics Of Cisplatin Binding To Histidine In A Protein" [Struct. Dyn. 1, 034701 (2014)].
Struct Dyn. V. 3 37101 2016
(for further references see the
PDB file header
)
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Hetero Components
(4, 12)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: DIMETHYL SULFOXIDE (DMSa)
3a: NITRATE ION (NO3a)
3b: NITRATE ION (NO3b)
3c: NITRATE ION (NO3c)
3d: NITRATE ION (NO3d)
4a: PLATINUM (II) ION (PTa)
4b: PLATINUM (II) ION (PTb)
4c: PLATINUM (II) ION (PTc)
4d: PLATINUM (II) ION (PTd)
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No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
2
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
3
NO3
4
Ligand/Ion
NITRATE ION
4
PT
4
Ligand/Ion
PLATINUM (II) ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:57 , ILE A:58 , ASN A:59 , TRP A:63 , ALA A:107 , TRP A:108
binding site for residue DMS A 201
02
AC2
SOFTWARE
ASN A:65 , GLY A:67 , ARG A:68 , THR A:69 , SER A:72 , HOH A:335 , HOH A:357
binding site for residue CL A 202
03
AC3
SOFTWARE
ARG A:21 , ASN A:65 , ASP A:66 , PRO A:79 , CYS A:80 , SER A:81 , HOH A:312
binding site for residue NO3 A 203
04
AC4
SOFTWARE
ASN A:46 , THR A:47 , ASP A:48 , LYS A:97 , HOH A:308 , HOH A:339 , HOH A:354
binding site for residue NO3 A 204
05
AC5
SOFTWARE
HIS A:15 , THR A:89 , PT A:206 , PT A:207
binding site for residue PT A 205
06
AC6
SOFTWARE
HIS A:15 , PT A:205 , PT A:207
binding site for residue PT A 206
07
AC7
SOFTWARE
HIS A:15 , PT A:205 , PT A:206
binding site for residue PT A 207
08
AC8
SOFTWARE
HIS A:15 , CL A:209 , CL A:212
binding site for residue PT A 208
09
AC9
SOFTWARE
PT A:208 , CL A:212
binding site for residue CL A 209
10
AD1
SOFTWARE
SER A:24 , LEU A:25 , GLY A:26 , GLN A:41 , GLN A:121 , ILE A:124 , HOH A:363 , HOH A:372
binding site for residue NO3 A 210
11
AD2
SOFTWARE
ASN A:65 , ASN A:74 , ASN A:77 , ILE A:78 , PRO A:79 , ARG A:112 , LYS A:116
binding site for residue NO3 A 211
12
AD3
SOFTWARE
HIS A:15 , ASN A:93 , LYS A:96 , PT A:208 , CL A:209
binding site for residue CL A 212
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (51 KB)
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