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5HJX
Asym. Unit
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Asym.Unit (1.3 MB)
Biol.Unit 1, α-C (1.3 MB)
Biol.Unit 1 (1.3 MB)
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(1)
Title
:
STRUCTURE FUNCTION STUDIES OF R. PALUSTRIS RUBISCO (A47V MUTANT; CABP-BOUND)
Authors
:
M. A. Arbing, A. Shin, S. Satagopan, J. A. North, F. R. Tabita
Date
:
13 Jan 16 (Deposition) - 18 Jan 17 (Release) - 18 Jan 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Rubisco, Hexamer, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Arbing, S. Satagopan, V. A. Varaljay, A. Shin, F. R. Tabita
Structure Function Studies Of R. Palustris Rubisco.
To Be Published
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Hetero Components
(3, 18)
Info
All Hetero Components
1a: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPa)
1b: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPb)
1c: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPc)
1d: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPd)
1e: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPe)
1f: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPf)
2a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
2b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
2c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
2d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
2e: LYSINE NZ-CARBOXYLIC ACID (KCXe)
2f: LYSINE NZ-CARBOXYLIC ACID (KCXf)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CAP
6
Ligand/Ion
2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
2
KCX
6
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
3
MG
6
Ligand/Ion
MAGNESIUM ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:165 , LYS A:167 , LYS A:169 , KCX A:192 , ASP A:194 , GLU A:195 , HIS A:288 , ARG A:289 , HIS A:322 , LYS A:330 , MET A:331 , SER A:369 , GLY A:370 , GLY A:371 , GLY A:394 , GLY A:395 , MG A:501 , HOH A:637 , HOH A:657 , HOH A:658 , HOH A:663 , HOH A:666 , HOH A:696 , HOH A:701 , GLU B:49 , THR B:54 , ASN B:112
binding site for residue CAP A 500
02
AC2
SOFTWARE
KCX A:192 , ASP A:194 , GLU A:195 , CAP A:500 , ASN B:112
binding site for residue MG A 501
03
AC3
SOFTWARE
GLU A:49 , THR A:54 , ASN A:112 , HOH A:719 , ILE B:165 , LYS B:167 , LYS B:169 , KCX B:192 , ASP B:194 , GLU B:195 , HIS B:288 , ARG B:289 , HIS B:322 , LYS B:330 , MET B:331 , SER B:369 , GLY B:370 , GLY B:371 , GLY B:394 , GLY B:395 , MG B:501 , HOH B:635 , HOH B:673 , HOH B:679 , HOH B:724 , HOH B:727 , HOH B:742 , HOH B:743
binding site for residue CAP B 500
04
AC4
SOFTWARE
ASN A:112 , LYS B:169 , KCX B:192 , ASP B:194 , GLU B:195 , CAP B:500
binding site for residue MG B 501
05
AC5
SOFTWARE
ILE C:165 , LYS C:167 , LYS C:169 , KCX C:192 , ASP C:194 , GLU C:195 , HIS C:288 , ARG C:289 , HIS C:322 , LYS C:330 , SER C:369 , GLY C:370 , GLY C:371 , ALA C:393 , GLY C:394 , GLY C:395 , MG C:501 , HOH C:620 , HOH C:678 , HOH C:682 , HOH C:690 , HOH C:700 , HOH C:708 , HOH C:716 , GLU D:49 , THR D:54 , ASN D:112 , HOH D:747
binding site for residue CAP C 500
06
AC6
SOFTWARE
LYS C:169 , KCX C:192 , ASP C:194 , GLU C:195 , CAP C:500 , ASN D:112
binding site for residue MG C 501
07
AC7
SOFTWARE
GLU C:49 , THR C:54 , ASN C:112 , ILE D:165 , LYS D:167 , LYS D:169 , KCX D:192 , ASP D:194 , GLU D:195 , HIS D:288 , ARG D:289 , HIS D:322 , LYS D:330 , MET D:331 , SER D:369 , GLY D:370 , GLY D:371 , GLY D:394 , GLY D:395 , MG D:501 , HOH D:630 , HOH D:655 , HOH D:668 , HOH D:690 , HOH D:708 , HOH D:713 , HOH D:724
binding site for residue CAP D 500
08
AC8
SOFTWARE
ASN C:112 , KCX D:192 , ASP D:194 , GLU D:195 , CAP D:500
binding site for residue MG D 501
09
AC9
SOFTWARE
ILE E:165 , LYS E:167 , LYS E:169 , KCX E:192 , ASP E:194 , GLU E:195 , HIS E:288 , ARG E:289 , HIS E:322 , LYS E:330 , MET E:331 , SER E:369 , GLY E:370 , GLY E:371 , GLY E:394 , GLY E:395 , MG E:501 , HOH E:634 , HOH E:650 , HOH E:656 , HOH E:661 , HOH E:686 , HOH E:712 , HOH E:728 , GLU F:49 , THR F:54 , ASN F:112 , HOH F:663 , HOH F:712
binding site for residue CAP E 500
10
AD1
SOFTWARE
LYS E:169 , KCX E:192 , ASP E:194 , GLU E:195 , CAP E:500 , ASN F:112
binding site for residue MG E 501
11
AD2
SOFTWARE
GLU E:49 , THR E:54 , ASN E:112 , HOH E:619 , HOH E:716 , ILE F:165 , LYS F:167 , LYS F:169 , KCX F:192 , ASP F:194 , GLU F:195 , HIS F:288 , ARG F:289 , HIS F:322 , LYS F:330 , MET F:331 , SER F:369 , GLY F:370 , GLY F:371 , GLY F:394 , GLY F:395 , MG F:501 , HOH F:626 , HOH F:630 , HOH F:632 , HOH F:649 , HOH F:660 , HOH F:729 , HOH F:762
binding site for residue CAP F 500
12
AD3
SOFTWARE
ASN E:112 , LYS F:169 , KCX F:192 , ASP F:194 , GLU F:195 , CAP F:500
binding site for residue MG F 501
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