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5HJ5
Asym. Unit
Info
Asym.Unit (398 KB)
Biol.Unit 1 (292 KB)
Biol.Unit 2 (295 KB)
Biol.Unit 3 (293 KB)
Biol.Unit 4 (302 KB)
Biol.Unit 5 (581 KB)
Biol.Unit 6 (595 KB)
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Title
:
CRYSTAL STRUCTURE OF TERTIARY COMPLEX OF GLUCOSAMINE-6-PHOSPHATE DEAMINASE FROM VIBRIO CHOLERAE WITH BETA-D-GLUCOSE-6-PHOSPHATE AND FRUCTOSE-6-PHOSPHATE
Authors
:
C. Chang, N. Maltseva, Y. Kim, K. Kwon, W. F. Anderson, A. Joachimiak, Ce Structural Genomics Of Infectious Diseases (Csgid)
Date
:
12 Jan 16 (Deposition) - 03 Feb 16 (Release) - 03 Feb 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (3x)
Biol. Unit 2: B (3x)
Biol. Unit 3: C (3x)
Biol. Unit 4: D (3x)
Biol. Unit 5: A,C (3x)
Biol. Unit 6: B,D (3x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Glucosamine-6-Phosphate Deaminase, Vibrio Cholerae, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Chang, N. Maltseva, Y. Kim, K. Kwon, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Tertiary Complex Of Glucosamine-6-Phosphate Deaminase From Vibrio Cholerae With Beta-D-Glucose-6-Phosphate And Fructose -6-Phosphate
To Be Published
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
2a: BETA-D-GLUCOSE-6-PHOSPHATE (BG6a)
2b: BETA-D-GLUCOSE-6-PHOSPHATE (BG6b)
2c: BETA-D-GLUCOSE-6-PHOSPHATE (BG6c)
2d: BETA-D-GLUCOSE-6-PHOSPHATE (BG6d)
3a: FRUCTOSE -6-PHOSPHATE (F6Ra)
3b: FRUCTOSE -6-PHOSPHATE (F6Rb)
3c: FRUCTOSE -6-PHOSPHATE (F6Rc)
3d: FRUCTOSE -6-PHOSPHATE (F6Rd)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACY
1
Ligand/Ion
ACETIC ACID
2
BG6
4
Ligand/Ion
BETA-D-GLUCOSE-6-PHOSPHATE
3
F6R
4
Ligand/Ion
FRUCTOSE -6-PHOSPHATE
4
GOL
6
Ligand/Ion
GLYCEROL
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:40 , THR A:41 , GLY A:42 , GLY A:43 , THR A:44 , MET A:71 , ASP A:72 , GLY A:137 , VAL A:138 , HIS A:143 , ALA A:145 , ARG A:172 , LYS A:208 , HOH A:420 , HOH A:448 , HOH A:449 , HOH A:479 , HOH A:485 , HOH A:489 , HOH A:550
binding site for residue F6R A 301
02
AC2
SOFTWARE
MET A:1 , ARG A:2 , SER A:151 , SER A:152 , ARG A:158 , LYS A:160 , THR A:161 , HOH A:405 , HOH A:427 , HOH A:445 , HOH A:466 , HOH A:474 , HOH A:496 , HOH A:585
binding site for residue BG6 A 302
03
AC3
SOFTWARE
TYR A:90 , PHE A:94 , ASN A:95 , ILE A:97 , ILE A:99 , GLU A:101
binding site for residue GOL A 303
04
AC4
SOFTWARE
ARG A:86 , TYR A:90 , GLU A:101 , ILE A:104 , LEU A:106 , HOH A:439 , HOH A:475
binding site for residue GOL A 304
05
AC5
SOFTWARE
LYS A:130 , LEU A:194 , ASP A:195 , ALA A:196 , GLN A:197 , PRO A:233 , HOH A:609
binding site for residue GOL A 305
06
AC6
SOFTWARE
THR B:41 , GLY B:42 , GLY B:43 , THR B:44 , MET B:71 , ASP B:72 , GLY B:137 , VAL B:138 , HIS B:143 , ALA B:145 , ARG B:172 , LYS B:208 , HOH B:431 , HOH B:435 , HOH B:450 , HOH B:468 , HOH B:479 , HOH B:490 , HOH B:505
binding site for residue F6R B 301
07
AC7
SOFTWARE
MET B:1 , ARG B:2 , SER B:151 , SER B:152 , ARG B:158 , LYS B:160 , THR B:161 , HOH B:408 , HOH B:416 , HOH B:446 , HOH B:447 , HOH B:464 , HOH B:551 , HOH B:590
binding site for residue BG6 B 302
08
AC8
SOFTWARE
TRP B:15 , HIS B:19
binding site for residue ACY B 303
09
AC9
SOFTWARE
ARG B:86 , TYR B:90 , GLU B:101 , ILE B:104 , LEU B:106 , HOH B:429 , HOH B:480
binding site for residue GOL B 304
10
AD1
SOFTWARE
PRO C:40 , THR C:41 , GLY C:42 , GLY C:43 , THR C:44 , MET C:71 , ASP C:72 , GLY C:137 , VAL C:138 , HIS C:143 , ALA C:145 , ARG C:172 , LYS C:208 , HOH C:425 , HOH C:438 , HOH C:451 , HOH C:458 , HOH C:467 , HOH C:485 , HOH C:523
binding site for residue F6R C 301
11
AD2
SOFTWARE
MET C:1 , ARG C:2 , SER C:151 , SER C:152 , ARG C:158 , LYS C:160 , THR C:161 , ASN C:262 , HOH C:411 , HOH C:414 , HOH C:439 , HOH C:464 , HOH C:468 , HOH C:495
binding site for residue BG6 C 302
12
AD3
SOFTWARE
ASN C:25 , PRO C:29 , VAL C:61 , SER C:62 , HOH C:401 , HOH C:410
binding site for residue GOL C 303
13
AD4
SOFTWARE
PRO D:40 , THR D:41 , GLY D:42 , GLY D:43 , THR D:44 , MET D:71 , ASP D:72 , TYR D:85 , GLY D:137 , VAL D:138 , HIS D:143 , ALA D:145 , ARG D:172 , LYS D:208 , HOH D:415 , HOH D:429 , HOH D:447 , HOH D:469 , HOH D:486 , HOH D:496 , HOH D:512
binding site for residue F6R D 301
14
AD5
SOFTWARE
MET D:1 , ARG D:2 , SER D:151 , SER D:152 , ARG D:158 , LYS D:160 , THR D:161 , ASN D:262 , HOH D:417 , HOH D:421 , HOH D:444 , HOH D:454 , HOH D:459 , HOH D:571 , HOH D:577
binding site for residue BG6 D 302
15
AD6
SOFTWARE
ARG D:86 , TYR D:90 , GLU D:101 , ILE D:104 , LEU D:106 , HOH D:416 , HOH D:516
binding site for residue GOL D 303
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SAPs(SNPs)/Variants
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Asym.Unit (398 KB)
Header - Asym.Unit
Biol.Unit 1 (292 KB)
Header - Biol.Unit 1
Biol.Unit 2 (295 KB)
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Biol.Unit 3 (293 KB)
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Biol.Unit 4 (302 KB)
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Biol.Unit 5 (581 KB)
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Biol.Unit 6 (595 KB)
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