PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
No precomputed SNP/Variant structure found.
Calculating the structure may take several minutes.
PLEASE WAIT...
Getting 'PROSITE' information from database.
5GTI
Biol. Unit 2
Info
Asym.Unit (2.2 MB)
Biol.Unit 1, α-C (1.1 MB)
Biol.Unit 1 (1.1 MB)
Biol.Unit 2, α-C (1.1 MB)
Biol.Unit 2 (1.1 MB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
NATIVE XFEL STRUCTURE OF PHOTOSYSTEM II (TWO FLASH DATASET)
Authors
:
M. Suga, J. R. Shen
Date
:
20 Aug 16 (Deposition) - 15 Mar 17 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,H,I,J,K,L,M,O,R,T,U,V,X,Y,Z,a,b,c,d,e,f,h,i,j,k,l,m,o,t,u,v,x,y,z
Biol. Unit 1: A,B,C,D,E,F,H,I,J,K,L,M,O,R,T,U,V,X,Y,Z (1x)
Biol. Unit 2: a,b,c,d,e,f,h,i,j,k,l,m,o,t,u,v,x,y,z (1x)
Keywords
:
Photosystem Ii, Photosynthesis, Psii, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Suga, F. Akita, M. Sugahara, M. Kubo, Y. Nakajima, T. Nakane, K. Yamashita, Y. Umena, M. Nakabayashi, T. Yamane, T. Nakano, M. Suzuki, T. Masuda, S. Inoue, T. Kimura, T. Nomura, S. Yonekura, L. J. Yu, T. Sakamoto, T. Motomura, J. H. Chen, Y. Kato, T. Noguchi, K. Tono, Y. Joti, T. Kameshima, T. Hatsui, E. Nango, R. Tanaka, H. Naitow, Y. Matsuura, A. Yamashita, M. Yamamoto, O. Nureki, M. Yabashi, T. Ishikawa, S. Iwata, J. R. Shen
Light-Induced Structural Changes And The Site Of O=O Bond Formation In Psii Caught By Xfel.
Nature V. 543 131 2017
[
close entry info
]
Hetero Components
(17, 101)
Info
All Hetero Components
01a: BETA-CAROTENE (BCRa)
01b: BETA-CAROTENE (BCRb)
01c: BETA-CAROTENE (BCRc)
01d: BETA-CAROTENE (BCRd)
01e: BETA-CAROTENE (BCRe)
01f: BETA-CAROTENE (BCRf)
01g: BETA-CAROTENE (BCRg)
01h: BETA-CAROTENE (BCRh)
01i: BETA-CAROTENE (BCRi)
01j: BETA-CAROTENE (BCRj)
01k: BETA-CAROTENE (BCRk)
01l: BETA-CAROTENE (BCRl)
01m: BETA-CAROTENE (BCRm)
01n: BETA-CAROTENE (BCRn)
01o: BETA-CAROTENE (BCRo)
01p: BETA-CAROTENE (BCRp)
01q: BETA-CAROTENE (BCRq)
01r: BETA-CAROTENE (BCRr)
01s: BETA-CAROTENE (BCRs)
01t: BETA-CAROTENE (BCRt)
01u: BETA-CAROTENE (BCRu)
01v: BETA-CAROTENE (BCRv)
02a: BICARBONATE ION (BCTa)
02b: BICARBONATE ION (BCTb)
03a: CALCIUM ION (CAa)
03b: CALCIUM ION (CAb)
03c: CALCIUM ION (CAc)
03d: CALCIUM ION (CAd)
03e: CALCIUM ION (CAe)
03f: CALCIUM ION (CAf)
03g: CALCIUM ION (CAg)
05a: CHLOROPHYLL A (CLAa)
05aa: CHLOROPHYLL A (CLAaa)
05ab: CHLOROPHYLL A (CLAab)
05ac: CHLOROPHYLL A (CLAac)
05ad: CHLOROPHYLL A (CLAad)
05ae: CHLOROPHYLL A (CLAae)
05af: CHLOROPHYLL A (CLAaf)
05ag: CHLOROPHYLL A (CLAag)
05ah: CHLOROPHYLL A (CLAah)
05ai: CHLOROPHYLL A (CLAai)
05aj: CHLOROPHYLL A (CLAaj)
05ak: CHLOROPHYLL A (CLAak)
05al: CHLOROPHYLL A (CLAal)
05am: CHLOROPHYLL A (CLAam)
05an: CHLOROPHYLL A (CLAan)
05ao: CHLOROPHYLL A (CLAao)
05ap: CHLOROPHYLL A (CLAap)
05aq: CHLOROPHYLL A (CLAaq)
05ar: CHLOROPHYLL A (CLAar)
05as: CHLOROPHYLL A (CLAas)
05at: CHLOROPHYLL A (CLAat)
05au: CHLOROPHYLL A (CLAau)
05av: CHLOROPHYLL A (CLAav)
05aw: CHLOROPHYLL A (CLAaw)
05ax: CHLOROPHYLL A (CLAax)
05ay: CHLOROPHYLL A (CLAay)
05az: CHLOROPHYLL A (CLAaz)
05b: CHLOROPHYLL A (CLAb)
05ba: CHLOROPHYLL A (CLAba)
05bb: CHLOROPHYLL A (CLAbb)
05bc: CHLOROPHYLL A (CLAbc)
05bd: CHLOROPHYLL A (CLAbd)
05be: CHLOROPHYLL A (CLAbe)
05bf: CHLOROPHYLL A (CLAbf)
05bg: CHLOROPHYLL A (CLAbg)
05bh: CHLOROPHYLL A (CLAbh)
05bi: CHLOROPHYLL A (CLAbi)
05bj: CHLOROPHYLL A (CLAbj)
05bk: CHLOROPHYLL A (CLAbk)
05bl: CHLOROPHYLL A (CLAbl)
05bm: CHLOROPHYLL A (CLAbm)
05bn: CHLOROPHYLL A (CLAbn)
05bo: CHLOROPHYLL A (CLAbo)
05bp: CHLOROPHYLL A (CLAbp)
05bq: CHLOROPHYLL A (CLAbq)
05br: CHLOROPHYLL A (CLAbr)
05c: CHLOROPHYLL A (CLAc)
05d: CHLOROPHYLL A (CLAd)
05e: CHLOROPHYLL A (CLAe)
05f: CHLOROPHYLL A (CLAf)
05g: CHLOROPHYLL A (CLAg)
05h: CHLOROPHYLL A (CLAh)
05i: CHLOROPHYLL A (CLAi)
05j: CHLOROPHYLL A (CLAj)
05k: CHLOROPHYLL A (CLAk)
05l: CHLOROPHYLL A (CLAl)
05m: CHLOROPHYLL A (CLAm)
05n: CHLOROPHYLL A (CLAn)
05o: CHLOROPHYLL A (CLAo)
05p: CHLOROPHYLL A (CLAp)
05q: CHLOROPHYLL A (CLAq)
05r: CHLOROPHYLL A (CLAr)
05s: CHLOROPHYLL A (CLAs)
05t: CHLOROPHYLL A (CLAt)
05u: CHLOROPHYLL A (CLAu)
05v: CHLOROPHYLL A (CLAv)
05w: CHLOROPHYLL A (CLAw)
05x: CHLOROPHYLL A (CLAx)
05y: CHLOROPHYLL A (CLAy)
05z: CHLOROPHYLL A (CLAz)
04a: CHLORIDE ION (CLa)
05b: CHLORIDE ION (CLb)
05c: CHLORIDE ION (CLc)
05d: CHLORIDE ION (CLd)
06a: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDa)
06b: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDb)
06c: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDc)
06d: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDd)
06e: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDe)
06f: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDf)
06g: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDg)
06h: DIGALACTOSYL DIACYL GLYCEROL (DGDG... (DGDh)
07a: FE (II) ION (FE2a)
07b: FE (II) ION (FE2b)
08a: N-FORMYLMETHIONINE (FMEa)
08b: N-FORMYLMETHIONINE (FMEb)
08c: N-FORMYLMETHIONINE (FMEc)
08d: N-FORMYLMETHIONINE (FMEd)
08e: N-FORMYLMETHIONINE (FMEe)
08f: N-FORMYLMETHIONINE (FMEf)
09a: GLYCEROL (GOLa)
09b: GLYCEROL (GOLb)
09c: GLYCEROL (GOLc)
09d: GLYCEROL (GOLd)
09e: GLYCEROL (GOLe)
09f: GLYCEROL (GOLf)
09g: GLYCEROL (GOLg)
09h: GLYCEROL (GOLh)
10a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
10b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
10c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
10d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
11a: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGa)
11b: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGb)
11c: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGc)
11d: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGd)
11e: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGe)
11f: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGf)
11g: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGg)
11h: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGh)
11i: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGi)
11j: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGj)
11k: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGk)
11l: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGl)
11m: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGm)
11n: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGn)
11o: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGo)
11p: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGp)
11q: HEPTYL 1-THIOHEXOPYRANOSIDE (HTGq)
12a: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGa)
12b: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGb)
12c: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGc)
12d: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGd)
12e: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGe)
12f: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGf)
12g: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGg)
12h: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGh)
12i: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGi)
12j: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCE... (LHGj)
13a: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGa)
13b: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGb)
13c: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGc)
13d: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGd)
13e: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGe)
13f: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGf)
13g: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGg)
13h: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGh)
13i: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGi)
13j: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGj)
13k: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGk)
13l: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGL... (LMGl)
14a: DODECYL-BETA-D-MALTOSIDE (LMTa)
14b: DODECYL-BETA-D-MALTOSIDE (LMTb)
14c: DODECYL-BETA-D-MALTOSIDE (LMTc)
14d: DODECYL-BETA-D-MALTOSIDE (LMTd)
14e: DODECYL-BETA-D-MALTOSIDE (LMTe)
14f: DODECYL-BETA-D-MALTOSIDE (LMTf)
14g: DODECYL-BETA-D-MALTOSIDE (LMTg)
14h: DODECYL-BETA-D-MALTOSIDE (LMTh)
14i: DODECYL-BETA-D-MALTOSIDE (LMTi)
14j: DODECYL-BETA-D-MALTOSIDE (LMTj)
14k: DODECYL-BETA-D-MALTOSIDE (LMTk)
14l: DODECYL-BETA-D-MALTOSIDE (LMTl)
14m: DODECYL-BETA-D-MALTOSIDE (LMTm)
14n: DODECYL-BETA-D-MALTOSIDE (LMTn)
15a: MAGNESIUM ION (MGa)
15b: MAGNESIUM ION (MGb)
16a: CA-MN4-O5 CLUSTER (OEXa)
16b: CA-MN4-O5 CLUSTER (OEXb)
17a: PHEOPHYTIN A (PHOa)
17b: PHEOPHYTIN A (PHOb)
17c: PHEOPHYTIN A (PHOc)
17d: PHEOPHYTIN A (PHOd)
18a: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27... (PL9a)
18b: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27... (PL9b)
18c: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27... (PL9c)
18d: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27... (PL9d)
19a: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDa)
19b: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDb)
19c: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDc)
19d: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDd)
19e: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDe)
19f: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDf)
19g: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDg)
19h: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO... (SQDh)
20a: UNKNOWN LIGAND (UNLa)
20b: UNKNOWN LIGAND (UNLb)
20c: UNKNOWN LIGAND (UNLc)
20d: UNKNOWN LIGAND (UNLd)
20e: UNKNOWN LIGAND (UNLe)
20f: UNKNOWN LIGAND (UNLf)
20g: UNKNOWN LIGAND (UNLg)
20h: UNKNOWN LIGAND (UNLh)
20i: UNKNOWN LIGAND (UNLi)
20j: UNKNOWN LIGAND (UNLj)
20k: UNKNOWN LIGAND (UNLk)
20l: UNKNOWN LIGAND (UNLl)
20m: UNKNOWN LIGAND (UNLm)
20n: UNKNOWN LIGAND (UNLn)
20o: UNKNOWN LIGAND (UNLo)
20p: UNKNOWN LIGAND (UNLp)
20q: UNKNOWN LIGAND (UNLq)
20r: UNKNOWN LIGAND (UNLr)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BCR
11
Ligand/Ion
BETA-CAROTENE
2
BCT
1
Ligand/Ion
BICARBONATE ION
3
CA
-1
Ligand/Ion
CALCIUM ION
4
CL
-1
Ligand/Ion
CHLORIDE ION
5
CLA
35
Ligand/Ion
CHLOROPHYLL A
6
DGD
4
Ligand/Ion
DIGALACTOSYL DIACYL GLYCEROL (DGDG)
7
FE2
1
Ligand/Ion
FE (II) ION
8
FME
3
Mod. Amino Acid
N-FORMYLMETHIONINE
9
GOL
3
Ligand/Ion
GLYCEROL
10
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
11
HTG
8
Ligand/Ion
HEPTYL 1-THIOHEXOPYRANOSIDE
12
LHG
5
Ligand/Ion
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
13
LMG
6
Ligand/Ion
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
14
LMT
5
Ligand/Ion
DODECYL-BETA-D-MALTOSIDE
15
MG
-1
Ligand/Ion
MAGNESIUM ION
16
OEX
1
Ligand/Ion
CA-MN4-O5 CLUSTER
17
PHO
2
Ligand/Ion
PHEOPHYTIN A
18
PL9
2
Ligand/Ion
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE
19
SQD
3
Ligand/Ion
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
20
UNL
9
Ligand/Ion
UNKNOWN LIGAND
[
close Hetero Component info
]
Sites
(116, 116)
Info
All Sites
001: AC8 (SOFTWARE)
002: AD1 (SOFTWARE)
003: AD2 (SOFTWARE)
004: AE4 (SOFTWARE)
005: AF3 (SOFTWARE)
006: AF6 (SOFTWARE)
007: AF7 (SOFTWARE)
008: AF8 (SOFTWARE)
009: AF9 (SOFTWARE)
010: AG3 (SOFTWARE)
011: AG8 (SOFTWARE)
012: AH1 (SOFTWARE)
013: AH2 (SOFTWARE)
014: AH3 (SOFTWARE)
015: AK6 (SOFTWARE)
016: AM5 (SOFTWARE)
017: AM6 (SOFTWARE)
018: AM7 (SOFTWARE)
019: AN1 (SOFTWARE)
020: AN7 (SOFTWARE)
021: AN8 (SOFTWARE)
022: AN9 (SOFTWARE)
023: AO1 (SOFTWARE)
024: AO2 (SOFTWARE)
025: AO3 (SOFTWARE)
026: AO4 (SOFTWARE)
027: AO5 (SOFTWARE)
028: AO6 (SOFTWARE)
029: AO7 (SOFTWARE)
030: AO8 (SOFTWARE)
031: AO9 (SOFTWARE)
032: AP1 (SOFTWARE)
033: AP2 (SOFTWARE)
034: AP3 (SOFTWARE)
035: AP4 (SOFTWARE)
036: AP5 (SOFTWARE)
037: AP6 (SOFTWARE)
038: AP7 (SOFTWARE)
039: AP8 (SOFTWARE)
040: AP9 (SOFTWARE)
041: AQ1 (SOFTWARE)
042: AQ2 (SOFTWARE)
043: AQ3 (SOFTWARE)
044: AQ4 (SOFTWARE)
045: AQ5 (SOFTWARE)
046: AQ6 (SOFTWARE)
047: AQ7 (SOFTWARE)
048: AQ8 (SOFTWARE)
049: AQ9 (SOFTWARE)
050: AR1 (SOFTWARE)
051: AR2 (SOFTWARE)
052: AR3 (SOFTWARE)
053: AR4 (SOFTWARE)
054: AR5 (SOFTWARE)
055: AR6 (SOFTWARE)
056: AR7 (SOFTWARE)
057: AR8 (SOFTWARE)
058: AR9 (SOFTWARE)
059: AS1 (SOFTWARE)
060: AS2 (SOFTWARE)
061: AS3 (SOFTWARE)
062: AS4 (SOFTWARE)
063: AS5 (SOFTWARE)
064: AS6 (SOFTWARE)
065: AS7 (SOFTWARE)
066: AS8 (SOFTWARE)
067: AS9 (SOFTWARE)
068: AT1 (SOFTWARE)
069: AT2 (SOFTWARE)
070: AT3 (SOFTWARE)
071: AT4 (SOFTWARE)
072: AT5 (SOFTWARE)
073: AT6 (SOFTWARE)
074: AT7 (SOFTWARE)
075: AT8 (SOFTWARE)
076: AT9 (SOFTWARE)
077: AU1 (SOFTWARE)
078: AU2 (SOFTWARE)
079: AU3 (SOFTWARE)
080: AU4 (SOFTWARE)
081: AU5 (SOFTWARE)
082: AU6 (SOFTWARE)
083: AU7 (SOFTWARE)
084: AU8 (SOFTWARE)
085: AU9 (SOFTWARE)
086: AV1 (SOFTWARE)
087: AV2 (SOFTWARE)
088: AV3 (SOFTWARE)
089: AV4 (SOFTWARE)
090: AV5 (SOFTWARE)
091: AV6 (SOFTWARE)
092: AV7 (SOFTWARE)
093: AV8 (SOFTWARE)
094: AV9 (SOFTWARE)
095: AW1 (SOFTWARE)
096: AW2 (SOFTWARE)
097: AW3 (SOFTWARE)
098: AW4 (SOFTWARE)
099: AW5 (SOFTWARE)
100: AW6 (SOFTWARE)
101: AW7 (SOFTWARE)
102: AW8 (SOFTWARE)
103: AW9 (SOFTWARE)
104: AX1 (SOFTWARE)
105: AX2 (SOFTWARE)
106: AX3 (SOFTWARE)
107: AX4 (SOFTWARE)
108: AX5 (SOFTWARE)
109: AX6 (SOFTWARE)
110: AX7 (SOFTWARE)
111: AX8 (SOFTWARE)
112: AX9 (SOFTWARE)
113: AY1 (SOFTWARE)
114: AY2 (SOFTWARE)
115: AY3 (SOFTWARE)
116: AY4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
001
AC8
SOFTWARE
LEU A:42 , ALA A:43 , CLA A:407 , HTG b:625
binding site for residue BCR A 408
002
AD1
SOFTWARE
ASP A:103 , TRP b:75 , HTG b:621 , HOH b:712 , HOH b:817
binding site for residue GOL A 410
003
AD2
SOFTWARE
TRP A:20 , ASN A:26 , ARG A:27 , LEU A:28 , PHE T:22 , LEU b:109 , TRP b:113 , TYR b:117 , CLA b:606 , BCR b:619
binding site for residue SQD A 411
004
AE4
SOFTWARE
LEU B:69 , GLY B:70 , VAL B:71 , TRP B:91 , VAL B:96 , HIS B:100 , VAL B:102 , LEU B:149 , GLY B:152 , PHE B:153 , PHE B:156 , HIS B:157 , PHE B:162 , GLY B:163 , PRO B:164 , CLA B:604 , CLA B:606 , CLA B:617 , BCR B:620 , SQD a:413
binding site for residue CLA B 607
005
AF3
SOFTWARE
VAL B:8 , HIS B:9 , VAL B:11 , CLA B:612 , CLA B:613 , CLA B:614 , BCR B:618 , LMG B:622 , LMT B:634 , GLN L:8 , VAL L:10 , PHE M:21 , LEU M:25 , LMT m:103 , PHE t:8
binding site for residue CLA B 615
006
AF6
SOFTWARE
MET B:25 , LEU B:29 , TRP B:115 , CLA B:614 , CLA B:615 , HOH B:861 , LEU M:13 , BCR t:101
binding site for residue BCR B 618
007
AF7
SOFTWARE
LEU B:29 , GLY B:32 , TRP B:33 , SER B:36 , VAL B:102 , CLA B:608 , SQD a:413 , BCR t:101
binding site for residue BCR B 619
008
AF8
SOFTWARE
LEU B:109 , TRP B:113 , CLA B:607 , CLA B:616 , CLA B:617 , SQD a:413
binding site for residue BCR B 620
009
AF9
SOFTWARE
ARG B:18 , SER B:104 , TRP B:115 , HOH B:712 , ARG L:7 , ARG l:14 , TYR l:18 , LEU m:16 , LMT m:103 , PHE t:19 , PHE t:23 , BCR t:101
binding site for residue SQD B 621
010
AG3
SOFTWARE
SER B:76 , TRP B:78 , GLU B:94 , LEU B:98 , LMT B:633 , TYR a:73 , GOL a:412 , HOH a:567 , GLY o:112 , GLY o:113
binding site for residue HTG B 624
011
AG8
SOFTWARE
TRP B:75 , ASP B:87 , GLY B:89 , PHE B:90 , HTG B:630 , LEU a:102
binding site for residue HTG B 629
012
AH1
SOFTWARE
LMT B:633 , LMT B:634 , LEU a:72 , FME t:1 , BCR t:101
binding site for residue LMT B 632
013
AH2
SOFTWARE
ALA B:43 , HTG B:624 , LMT B:632 , HOH B:787 , HOH B:807 , LEU a:72 , TYR a:73 , ARG d:304
binding site for residue LMT B 633
014
AH3
SOFTWARE
TYR B:40 , CLA B:615 , LMG B:622 , LMT B:632 , LEU M:6 , ALA m:12 , FME t:1 , GLU t:2 , PHE t:8 , HOH t:202
binding site for residue LMT B 634
015
AK6
SOFTWARE
LEU A:72 , TYR A:73 , ARG D:304 , ALA b:43 , HTG b:621 , LMT b:628
binding site for residue LMT D 403
016
AM5
SOFTWARE
ARG L:14 , TYR L:18 , HOH L:203 , ALA T:15 , PHE T:19 , PHE T:23 , BCR T:101 , ARG b:18 , LEU b:29 , SER b:104 , TRP b:115 , CLA b:614 , BCR b:617 , ARG l:7
binding site for residue SQD L 102
017
AM6
SOFTWARE
GLU M:30 , SER M:31 , GLN M:32 , GLN M:33 , HOH M:209 , CLA b:614 , ARG l:7 , PRO l:9 , VAL l:10 , VAL m:20 , ILE m:24 , GLN m:28 , GLN m:32
binding site for residue LMT M 101
018
AM7
SOFTWARE
FME M:1 , GLU M:2 , GLN M:5 , HOH M:201 , HOH M:202 , HOH M:214 , PHE T:8 , LMT b:628 , LEU m:6 , HOH m:210
binding site for residue LMT M 103
019
AN1
SOFTWARE
SQD L:102 , PHE T:8 , ILE T:14 , PHE T:18 , TRP b:33 , BCR b:618 , LMT b:628
binding site for residue BCR T 101
020
AN7
SOFTWARE
HIS a:215 , HIS a:272 , BCT a:419 , HIS d:214 , HIS d:268
binding site for residue FE2 a 401
021
AN8
SOFTWARE
ASN a:181 , GLU a:333 , LYS d:317 , HOH d:580
binding site for residue CL a 402
022
AN9
SOFTWARE
HIS a:337 , ASN a:338 , PHE a:339 , GLY c:353 , GLU c:354 , HOH c:630
binding site for residue CL a 403
023
AO1
SOFTWARE
TYR a:147 , PRO a:150 , SER a:153 , VAL a:157 , MET a:183 , PHE a:186 , GLN a:187 , LEU a:193 , HIS a:198 , GLY a:201 , PHE a:206 , ALA a:286 , ALA a:287 , ILE a:290 , CLA a:405 , CLA a:406 , PHO a:407 , CLA d:402
binding site for residue CLA a 404
024
AO2
SOFTWARE
MET a:172 , ILE a:176 , THR a:179 , MET a:183 , CLA a:404 , PHO a:407 , HOH a:564 , HOH a:579 , MET d:198 , VAL d:201 , ALA d:202 , CLA d:402 , PL9 d:405 , HOH d:524
binding site for residue CLA a 405
025
AO3
SOFTWARE
GLN a:199 , VAL a:202 , ALA a:203 , LEU a:210 , TRP a:278 , CLA a:404 , PHO a:408 , PL9 a:415 , HOH a:518 , HOH a:587 , HOH a:612 , PHE d:157 , VAL d:175 , ILE d:178 , LEU d:182 , CLA d:402 , LMG j:101
binding site for residue CLA a 406
026
AO4
SOFTWARE
LEU a:41 , ALA a:44 , THR a:45 , TYR a:126 , GLN a:130 , ALA a:146 , TYR a:147 , PRO a:279 , CLA a:404 , CLA a:405 , LEU d:205 , ALA d:208 , LEU d:209 , ILE d:213 , TRP d:253 , PHE d:257
binding site for residue PHO a 407
027
AO5
SOFTWARE
PHE a:206 , ALA a:209 , LEU a:210 , MET a:214 , CLA a:406 , PL9 a:415 , ALA d:41 , GLY d:121 , LEU d:122 , PHE d:125 , GLN d:129 , ASN d:142 , ALA d:145 , PHE d:146 , PHE d:153 , GLY d:174 , VAL d:175 , PRO d:275 , CLA d:402
binding site for residue PHO a 408
028
AO6
SOFTWARE
ILE a:36 , PRO a:39 , THR a:40 , PHE a:93 , PRO a:95 , ILE a:96 , TRP a:97 , LEU a:114 , HIS a:118 , BCR a:410 , LMG a:417 , CLA c:505 , CLA c:506 , DGD c:516 , VAL i:12 , THR i:13
binding site for residue CLA a 409
029
AO7
SOFTWARE
LEU a:42 , ALA a:43 , CLA a:409
binding site for residue BCR a 410
030
AO8
SOFTWARE
LEU a:200 , ALA a:203 , ASN a:267 , SER a:270 , TRP a:278 , VAL a:281 , GLN c:28 , ALA c:34 , TRP c:36 , CLA c:508 , LMG c:519 , SER d:230 , PHE d:232 , ARG d:233 , LHG d:408 , PHE k:37
binding site for residue SQD a 411
031
AO9
SOFTWARE
TRP B:75 , SER B:76 , HTG B:624 , ASP a:103 , HOH a:536 , HOH a:561 , HOH a:567
binding site for residue GOL a 412
032
AP1
SOFTWARE
TRP B:113 , TYR B:117 , CLA B:607 , BCR B:619 , BCR B:620 , TRP a:20 , ASN a:26 , ARG a:27 , LEU a:28 , LEU a:42 , LHG d:407 , PHE t:22 , BCR t:101
binding site for residue SQD a 413
033
AP2
SOFTWARE
ASP a:170 , GLU a:189 , HIS a:332 , GLU a:333 , HIS a:337 , ASP a:342 , ALA a:344 , HOH a:501 , HOH a:507 , HOH a:515 , HOH a:543 , HOH a:556 , HOH a:608 , GLU c:354 , ARG c:357
binding site for residue OEX a 414
034
AP3
SOFTWARE
PHE a:211 , MET a:214 , HIS a:215 , LEU a:218 , HIS a:252 , PHE a:255 , ILE a:259 , SER a:264 , PHE a:265 , LEU a:271 , PHE a:274 , CLA a:406 , PHO a:408 , CLA d:402 , CLA d:403 , LHG e:101 , VAL f:18 , ALA f:22 , THR f:25 , LEU f:26 , SQD f:101 , THR x:24
binding site for residue PL9 a 415
035
AP4
SOFTWARE
TRP a:97 , GLU a:98 , PHE a:117 , CLA a:409 , HOH a:542 , HOH a:594 , LEU c:213 , LEU c:214 , SER c:216 , PHE c:218 , GLU c:221 , TRP c:223 , PHE c:284 , CLA c:505 , DGD c:516 , HOH c:711 , HOH c:714 , LYS i:5 , TYR i:9
binding site for residue LMG a 417
036
AP5
SOFTWARE
ASN a:12 , TRP a:14 , GLU a:15 , HOH a:504 , TRP c:259 , ARG c:262 , LEU i:24 , SER i:25 , GLY i:26 , ARG i:30
binding site for residue LMT a 418
037
AP6
SOFTWARE
HIS a:215 , GLU a:244 , TYR a:246 , HIS a:272 , FE2 a:401 , HIS d:214 , TYR d:244 , HIS d:268
binding site for residue BCT a 419
038
AP7
SOFTWARE
TRP b:185 , GLY b:186 , PHE b:190 , CLA b:602 , HTG b:623 , HOH b:756 , PHE h:41 , BCR h:102
binding site for residue CLA b 601
039
AP8
SOFTWARE
GLY b:189 , PHE b:190 , PRO b:192 , GLY b:197 , HIS b:201 , VAL b:208 , PHE b:247 , VAL b:251 , CLA b:601 , CLA b:603 , CLA b:609 , HOH b:851 , VAL d:154 , ILE h:45 , LEU h:46 , TYR h:49
binding site for residue CLA b 602
040
AP9
SOFTWARE
ARG b:68 , LEU b:69 , ALA b:146 , PHE b:153 , MET b:166 , HIS b:201 , HIS b:202 , VAL b:252 , THR b:262 , CLA b:602 , CLA b:604 , CLA b:605 , CLA b:606 , CLA b:608 , HOH b:733 , MET h:35 , PHE h:38
binding site for residue CLA b 603
041
AQ1
SOFTWARE
TRP b:33 , PHE b:61 , PHE b:65 , ARG b:68 , VAL b:245 , ALA b:248 , ALA b:249 , VAL b:252 , PHE b:451 , HIS b:455 , PHE b:458 , PHE b:462 , CLA b:603 , CLA b:605 , CLA b:607 , CLA b:612 , CLA b:613 , CLA b:615
binding site for residue CLA b 604
042
AQ2
SOFTWARE
THR b:27 , VAL b:30 , TRP b:33 , ALA b:34 , VAL b:62 , MET b:66 , HIS b:100 , LEU b:103 , ALA b:205 , CLA b:603 , CLA b:604 , CLA b:606 , CLA b:610 , CLA b:612 , CLA b:615 , HOH b:760
binding site for residue CLA b 605
043
AQ3
SOFTWARE
SQD A:411 , LEU b:69 , GLY b:70 , VAL b:71 , TRP b:91 , VAL b:96 , ALA b:99 , HIS b:100 , VAL b:102 , LEU b:149 , GLY b:152 , PHE b:153 , PHE b:156 , HIS b:157 , PHE b:162 , PRO b:164 , CLA b:603 , CLA b:605 , BCR b:619
binding site for residue CLA b 606
044
AQ4
SOFTWARE
TRP b:33 , TYR b:40 , GLN b:58 , GLY b:59 , MET b:60 , PHE b:61 , THR b:327 , GLY b:328 , PRO b:329 , TRP b:450 , PHE b:451 , CLA b:604 , BCR b:618 , HOH b:866 , LHG d:406 , LMG m:101
binding site for residue CLA b 607
045
AQ5
SOFTWARE
LEU b:229 , THR b:236 , SER b:239 , SER b:240 , ALA b:243 , PHE b:463 , HIS b:466 , LEU b:474 , CLA b:603 , CLA b:609 , CLA b:610 , HOH b:707 , HOH b:830 , PHE d:120 , ILE d:123 , MET d:126 , ILE d:150
binding site for residue CLA b 608
046
AQ6
SOFTWARE
PHE b:139 , VAL b:208 , ALA b:212 , PHE b:215 , HIS b:216 , VAL b:219 , PRO b:221 , PRO b:222 , LEU b:229 , CLA b:602 , CLA b:608 , CLA b:610 , THR h:27 , MET h:31 , PHE h:34 , LEU h:43 , BCR h:102
binding site for residue CLA b 609
047
AQ7
SOFTWARE
LEU b:135 , MET b:138 , PHE b:139 , HIS b:142 , LEU b:143 , MET b:231 , ILE b:234 , THR b:236 , VAL b:237 , SER b:240 , SER b:241 , CLA b:605 , CLA b:608 , CLA b:609 , CLA b:612 , CLA b:615 , HOH b:752
binding site for residue CLA b 610
048
AQ8
SOFTWARE
TYR b:6 , ARG b:7 , VAL b:8 , HIS b:9 , THR b:10 , LEU b:238 , ILE b:242 , LEU b:461 , PHE b:462 , GLY b:465 , TRP b:468 , HIS b:469 , ARG b:472 , CLA b:612 , CLA b:613 , CLA b:614 , HOH b:785 , LHG d:406
binding site for residue CLA b 611
049
AQ9
SOFTWARE
HIS b:9 , LEU b:19 , HIS b:23 , HIS b:26 , THR b:27 , VAL b:237 , LEU b:238 , SER b:241 , VAL b:245 , CLA b:604 , CLA b:605 , CLA b:610 , CLA b:611 , CLA b:613 , CLA b:614 , CLA b:615 , HOH b:786
binding site for residue CLA b 612
050
AR1
SOFTWARE
HIS b:9 , HIS b:26 , TRP b:33 , PHE b:462 , CLA b:604 , CLA b:611 , CLA b:612 , CLA b:614 , BCR b:617 , BCR b:618
binding site for residue CLA b 613
051
AR2
SOFTWARE
SQD L:102 , LMT M:101 , VAL b:8 , HIS b:9 , VAL b:11 , LEU b:29 , TRP b:115 , CLA b:611 , CLA b:612 , CLA b:613 , BCR b:617 , GLN l:8 , VAL l:10 , PHE m:21 , LEU m:25 , LMG m:101
binding site for residue CLA b 614
052
AR3
SOFTWARE
HIS b:23 , LEU b:133 , MET b:138 , HIS b:142 , LEU b:145 , CLA b:604 , CLA b:605 , CLA b:610 , CLA b:612 , CLA b:616 , BCR b:619 , LEU h:11 , LEU h:14
binding site for residue CLA b 615
053
AR4
SOFTWARE
ILE b:20 , LEU b:24 , TRP b:113 , HIS b:114 , CLA b:615 , BCR b:619 , THR h:5 , LEU h:7 , GLY h:8
binding site for residue CLA b 616
054
AR5
SOFTWARE
SQD L:102 , MET b:25 , LEU b:29 , TRP b:115 , CLA b:613 , CLA b:614 , LEU m:13
binding site for residue BCR b 617
055
AR6
SOFTWARE
BCR T:101 , LEU b:29 , GLY b:32 , TRP b:33 , SER b:36 , VAL b:102 , SER b:104 , GLY b:105 , CLA b:607 , CLA b:613
binding site for residue BCR b 618
056
AR7
SOFTWARE
SQD A:411 , LEU b:109 , CLA b:606 , CLA b:615 , CLA b:616
binding site for residue BCR b 619
057
AR8
SOFTWARE
ARG b:224 , LYS b:227 , ASP d:16 , TRP h:25
binding site for residue LMT b 620
058
AR9
SOFTWARE
GOL A:410 , LMT D:403 , GLY O:112 , SER b:76 , TRP b:78 , GLU b:94 , LEU b:98 , HOH b:712 , HOH b:848
binding site for residue HTG b 621
059
AS1
SOFTWARE
LYS b:341 , LYS b:423 , GLU b:431 , PHE b:432 , THR b:434 , HOH b:709 , HOH b:796 , HOH b:806 , GLN o:176 , ALA o:177 , LYS o:178 , GLU o:179
binding site for residue HTG b 622
060
AS2
SOFTWARE
TRP b:185 , ILE b:207 , CLA b:601 , THR o:25
binding site for residue HTG b 623
061
AS3
SOFTWARE
ILE b:13 , ASN b:14 , LEU b:133 , GLY b:232 , ILE b:234 , TYR h:18
binding site for residue GOL b 624
062
AS4
SOFTWARE
ILE A:50 , BCR A:408 , TRP b:75 , ASP b:87 , PHE b:90 , HTG b:626 , HOH b:817
binding site for residue HTG b 625
063
AS5
SOFTWARE
ASP b:87 , GLY b:89 , PHE b:90 , HTG b:625
binding site for residue HTG b 626
064
AS6
SOFTWARE
LMT D:403 , LMT M:103 , FME T:1 , BCR T:101 , HOH T:202 , ALA b:43 , HOH b:730
binding site for residue LMT b 628
065
AS7
SOFTWARE
SER a:232 , ASN a:234 , PRO b:4 , TRP b:5 , TYR b:6 , TRP d:266 , PHE d:273 , PL9 d:405 , LHG d:406 , LHG d:407 , GLU l:11 , LEU l:12 , ASN l:13 , SER l:16 , GLY l:20 , LEU l:22 , VAL m:17 , LMG m:101
binding site for residue LHG b 630
066
AS8
SOFTWARE
LEU c:95 , LEU c:168 , GLY c:171 , ALA c:172 , LEU c:185 , VAL c:233 , HIS c:237 , ILE c:240 , MET c:282 , PHE c:289 , TYR c:297 , CLA c:502 , CLA c:503 , CLA c:506 , CLA c:507 , BCR c:515 , HOH c:665
binding site for residue CLA c 501
067
AS9
SOFTWARE
TRP c:63 , HIS c:91 , LEU c:95 , LEU c:174 , LYS c:178 , LEU c:279 , MET c:282 , ALA c:286 , VAL c:290 , TYR c:297 , HIS c:430 , LEU c:433 , PHE c:437 , CLA c:501 , CLA c:503 , CLA c:504 , CLA c:510 , CLA c:512 , HOH c:648
binding site for residue CLA c 502
068
AT1
SOFTWARE
ILE c:60 , VAL c:61 , THR c:68 , LEU c:88 , HIS c:91 , VAL c:114 , HIS c:118 , CLA c:501 , CLA c:502 , CLA c:512 , LMG c:520 , HOH c:665
binding site for residue CLA c 503
069
AT2
SOFTWARE
TRP c:63 , MET c:67 , PHE c:70 , GLN c:84 , GLY c:85 , ILE c:87 , TRP c:425 , SER c:429 , HIS c:430 , PHE c:436 , CLA c:502 , CLA c:508 , CLA c:510 , DGD c:517 , DGD c:518 , LMG c:519 , HOH c:636 , HOH c:713 , LHG d:408 , PRO k:26 , VAL k:30
binding site for residue CLA c 504
070
AT3
SOFTWARE
MET a:127 , TRP a:131 , CLA a:409 , LMG a:417 , PHE c:264 , TYR c:274 , GLY c:277 , MET c:281 , LEU c:438 , HIS c:441 , LEU c:442 , ALA c:445 , ARG c:449 , CLA c:507 , BCR c:515 , HOH c:641 , VAL i:16
binding site for residue CLA c 505
071
AT4
SOFTWARE
CLA a:409 , LEU c:165 , LEU c:213 , ILE c:243 , GLY c:247 , TRP c:250 , HIS c:251 , THR c:254 , THR c:255 , PRO c:256 , PHE c:257 , TRP c:259 , CLA c:501 , CLA c:507 , BCR c:515 , DGD c:516 , HOH c:704
binding site for residue CLA c 506
072
AT5
SOFTWARE
MET c:157 , THR c:158 , LEU c:161 , HIS c:164 , LEU c:165 , LEU c:168 , PHE c:264 , TRP c:266 , TYR c:271 , TYR c:274 , SER c:275 , MET c:282 , CLA c:501 , CLA c:505 , CLA c:506 , CLA c:509 , HOH c:629
binding site for residue CLA c 507
073
AT6
SOFTWARE
SQD a:411 , TRP c:36 , ALA c:37 , GLY c:38 , ASN c:39 , ALA c:40 , LEU c:272 , LEU c:276 , PHE c:436 , PHE c:437 , GLY c:440 , TRP c:443 , HIS c:444 , ARG c:447 , CLA c:504 , CLA c:509 , CLA c:510 , CLA c:511 , DGD c:517 , LMG c:519 , LHG d:408
binding site for residue CLA c 508
074
AT7
SOFTWARE
ASN c:39 , LEU c:49 , ALA c:52 , HIS c:53 , HIS c:56 , TYR c:149 , TRP c:151 , LEU c:168 , TYR c:271 , LEU c:272 , SER c:275 , LEU c:276 , LEU c:279 , CLA c:507 , CLA c:508 , CLA c:510 , CLA c:511 , CLA c:512
binding site for residue CLA c 509
075
AT8
SOFTWARE
ASN c:39 , HIS c:56 , LEU c:59 , TRP c:63 , LEU c:279 , PHE c:437 , CLA c:502 , CLA c:504 , CLA c:508 , CLA c:509 , CLA c:511 , LHG d:408 , PRO k:29 , LEU k:33
binding site for residue CLA c 510
076
AT9
SOFTWARE
ARG c:26 , TRP c:35 , GLY c:38 , ASN c:39 , ARG c:41 , LEU c:42 , LEU c:45 , LYS c:48 , ALA c:52 , PHE c:127 , ILE c:134 , CLA c:508 , CLA c:509 , CLA c:510 , PHE k:32 , LEU k:33 , TRP k:39 , GLN k:40 , BCR k:101 , ASN y:45 , LEU y:46 , MET z:19 , ALA z:28
binding site for residue CLA c 511
077
AU1
SOFTWARE
HIS c:53 , ALA c:57 , LEU c:125 , PHE c:146 , PHE c:147 , PHE c:163 , HIS c:164 , VAL c:167 , CLA c:502 , CLA c:503 , CLA c:509 , CLA c:513 , BCR c:514 , HOH c:657
binding site for residue CLA c 512
078
AU2
SOFTWARE
LEU c:50 , VAL c:124 , LEU c:125 , GLY c:128 , TYR c:131 , HIS c:132 , PRO c:137 , TYR c:143 , PHE c:147 , CLA c:512 , BCR c:514 , LMG c:520 , LMG z:101
binding site for residue CLA c 513
079
AU3
SOFTWARE
PHE c:112 , SER c:121 , VAL c:124 , CLA c:512 , CLA c:513 , LMG c:520 , TYR k:15
binding site for residue BCR c 514
080
AU4
SOFTWARE
ILE c:209 , TYR c:212 , LEU c:213 , VAL c:233 , GLY c:236 , HIS c:237 , PHE c:264 , CLA c:501 , CLA c:505 , CLA c:506 , PHE i:23 , LEU i:24
binding site for residue BCR c 515
081
AU5
SOFTWARE
ILE a:160 , ILE a:163 , CLA a:409 , LMG a:417 , PRO c:217 , GLY c:219 , GLY c:220 , GLU c:221 , GLY c:222 , VAL c:225 , SER c:226 , VAL c:227 , ASN c:228 , CYS c:288 , PHE c:292 , ASN c:293 , ASN c:294 , THR c:295 , ASP c:360 , PHE c:361 , ARG c:362 , LEU c:438 , CLA c:506 , HOH c:603 , HOH c:625 , HOH c:647 , HOH c:687 , HOH c:716
binding site for residue DGD c 516
082
AU6
SOFTWARE
PHE a:197 , GLU c:83 , GLN c:84 , GLY c:85 , LEU c:404 , SER c:406 , ASN c:418 , PHE c:419 , VAL c:420 , TRP c:425 , THR c:428 , SER c:429 , CLA c:504 , CLA c:508 , DGD c:518 , LMG c:519 , HOH c:606 , HOH c:677 , TYR j:32 , HOH j:202
binding site for residue DGD c 517
083
AU7
SOFTWARE
GLN a:199 , TRP a:278 , PHE a:300 , ASN a:301 , PHE a:302 , SER a:305 , ASN c:405 , VAL c:407 , ASN c:415 , SER c:416 , ASN c:418 , CLA c:504 , DGD c:517 , HOH c:614 , HOH c:615 , HOH c:673 , LHG d:408 , ALA j:31 , TYR j:32 , GLY j:36 , SER j:37 , SER j:38 , LMG j:101 , GLN v:34
binding site for residue DGD c 518
084
AU8
SOFTWARE
SQD a:411 , HIS c:74 , CLA c:504 , CLA c:508 , DGD c:517 , HOH c:653 , ILE j:21 , VAL k:27 , GLN y:21
binding site for residue LMG c 519
085
AU9
SOFTWARE
ASP c:107 , PHE c:109 , VAL c:113 , VAL c:117 , HIS c:118 , SER c:121 , CLA c:503 , CLA c:513 , BCR c:514 , HTG c:521 , VAL z:62
binding site for residue LMG c 520
086
AV1
SOFTWARE
TRP c:97 , PHE c:182 , GLY c:183 , LMG c:520
binding site for residue HTG c 521
087
AV2
SOFTWARE
PHE c:181 , ASN c:201 , PRO c:202
binding site for residue HTG c 522
088
AV3
SOFTWARE
ASN c:155 , THR c:158 , THR c:159 , HIS c:251 , ILE c:252 , THR c:254
binding site for residue CA c 523
089
AV4
SOFTWARE
PHE c:22 , THR c:24 , ASP c:27 , GLU c:29 , SER c:30 , HOH c:678
binding site for residue CA c 524
090
AV5
SOFTWARE
GLY a:74 , ASN a:75 , ASN a:76 , SER d:300 , GLN d:301 , HOH l:102 , FME m:1 , GLU t:2 , TYR t:6
binding site for residue GOL d 401
091
AV6
SOFTWARE
MET a:183 , CLA a:404 , CLA a:405 , CLA a:406 , PHO a:408 , PL9 a:415 , PRO d:149 , VAL d:156 , PHE d:181 , LEU d:182 , PHE d:185 , GLN d:186 , TRP d:191 , THR d:192 , HIS d:197 , GLY d:200 , VAL d:201 , VAL d:204 , SER d:282 , ALA d:283 , VAL d:286
binding site for residue CLA d 402
092
AV7
SOFTWARE
PL9 a:415 , LEU d:36 , PRO d:39 , CYS d:40 , LEU d:43 , LEU d:89 , LEU d:90 , LEU d:91 , LEU d:92 , TRP d:93 , THR d:112 , PHE d:113 , HIS d:117 , LEU h:37 , LEU h:39 , HOH h:202
binding site for residue CLA d 403
093
AV8
SOFTWARE
TYR d:42 , LEU d:43 , GLY d:46 , GLY d:47 , LEU d:49 , THR d:50 , PRO f:29 , VAL j:20 , VAL j:24 , LMG j:101
binding site for residue BCR d 404
094
AV9
SOFTWARE
CLA a:405 , LHG b:630 , MET d:198 , ALA d:202 , HIS d:214 , THR d:217 , TRP d:253 , ALA d:260 , PHE d:261 , LEU d:267 , VAL d:274 , VAL l:26
binding site for residue PL9 d 405
095
AW1
SOFTWARE
ASN a:234 , HOH a:503 , TYR b:6 , ARG b:7 , LEU b:461 , PHE b:464 , TRP b:468 , CLA b:607 , CLA b:611 , LHG b:630 , HOH b:785 , TYR d:141 , ILE d:144 , TRP d:266 , PHE d:269 , HOH d:575 , LMG m:101
binding site for residue LHG d 406
096
AW2
SOFTWARE
SQD a:413 , LHG b:630 , PHE d:257 , ALA d:260 , PHE d:261 , SER d:262 , ASN d:263 , TRP d:266 , PHE d:270 , HOH d:553 , ASN l:13 , THR l:15 , TYR l:18 , LEU l:29 , HOH l:106 , PHE t:17 , ALA t:20
binding site for residue LHG d 407
097
AW3
SOFTWARE
ARG a:140 , TRP a:142 , PHE a:273 , SQD a:411 , TRP c:443 , ARG c:447 , CLA c:504 , CLA c:508 , CLA c:510 , DGD c:518 , GLU d:219 , ASN d:220 , ALA d:229 , THR d:231 , PHE d:232 , HOH d:574
binding site for residue LHG d 408
098
AW4
SOFTWARE
ILE a:259 , PHE a:260 , TYR a:262 , PL9 a:415 , PHE d:27 , VAL d:28 , GLU e:7 , PRO e:9 , PHE e:10 , SER e:11 , ARG f:19
binding site for residue LHG e 101
099
AW5
SOFTWARE
TRP e:35 , SER e:39 , HOH e:202 , ILE f:43 , GLN f:44
binding site for residue LMT e 102
100
AW6
SOFTWARE
PHE e:10 , ILE e:13 , ARG e:18 , TYR e:19 , HIS e:23 , THR e:26 , ILE e:27 , ARG f:19 , TRP f:20 , VAL f:23 , HIS f:24 , ALA f:27 , VAL f:28 , ILE f:31
binding site for residue HEM e 103
101
AW7
SOFTWARE
GLU U:69 , PL9 a:415 , ARG d:26 , GLU e:7 , ILE f:15 , PHE f:16 , THR f:17 , VAL f:18 , THR x:24 , ILE x:31 , ASP x:35
binding site for residue SQD f 101
102
AW8
SOFTWARE
GLY d:13 , TRP d:14 , PHE d:15 , ASP d:16 , TRP h:25 , PRO h:29
binding site for residue HTG h 101
103
AW9
SOFTWARE
CLA b:601 , CLA b:609 , PHE h:34 , LEU h:37 , PHE h:38 , ILE h:44 , ILE x:3
binding site for residue BCR h 102
104
AX1
SOFTWARE
TYR b:193 , PHE b:250 , TYR b:258 , TYR b:273 , GLN b:274 , TYR b:279 , PHE b:463 , HOH b:724 , HIS d:87 , ILE d:159 , LEU d:162 , GLY d:163 , LEU d:291 , TYR h:49 , ASN h:50 , VAL h:60 , SER h:61 , TRP h:62 , HOH h:203 , HOH h:204 , HOH h:209
binding site for residue DGD h 103
105
AX2
SOFTWARE
CLA a:406 , DGD c:518 , HOH c:614 , TYR d:67 , GLY d:70 , CYS d:71 , ASN d:72 , PHE d:73 , BCR d:404 , THR f:30 , MET f:40 , GLN f:41 , PHE j:27 , GLY j:30 , ALA j:31 , LEU j:35 , MG j:103
binding site for residue LMG j 101
106
AX3
SOFTWARE
HOH f:203 , GLY j:30 , ALA j:33 , LEU j:35 , LMG j:101
binding site for residue MG j 103
107
AX4
SOFTWARE
GLY c:58 , LEU c:59 , SER c:122 , ALA c:123 , CLA c:511 , PHE k:32 , BCR y:101 , SER z:16
binding site for residue BCR k 101
108
AX5
SOFTWARE
TYR b:40 , THR b:327 , PRO b:329 , LYS b:332 , CLA b:607 , CLA b:614 , LHG b:630 , LHG d:406 , PHE l:35 , ASN m:4 , LEU m:6 , ALA m:10 , HOH m:201 , HOH m:214 , HOH m:217
binding site for residue LMG m 101
109
AX6
SOFTWARE
CLA B:615 , SQD B:621 , PRO L:9 , VAL L:10 , ILE M:24 , GLN M:28 , GLN M:32 , VAL m:27 , GLU m:30 , SER m:31 , GLN m:32 , LYS m:34 , HOH m:209
binding site for residue LMT m 103
110
AX7
SOFTWARE
THR o:138 , ASN o:200 , VAL o:201 , HOH o:401 , HOH o:500 , HOH o:512
binding site for residue CA o 301
111
AX8
SOFTWARE
TRP B:33 , MET B:37 , BCR B:618 , BCR B:619 , SQD B:621 , LMT B:632 , SQD a:413 , PHE t:8 , PHE t:17 , PHE t:18
binding site for residue BCR t 101
112
AX9
SOFTWARE
PHE c:62 , THR j:14 , MET j:18 , ILE k:28 , LEU k:31 , PHE k:37 , VAL k:38 , BCR k:101 , ILE y:28 , GLY y:29 , GLY y:32 , SER z:16 , PHE z:17
binding site for residue BCR y 101
113
AY1
SOFTWARE
PHE c:127 , TYR c:131 , ARG c:135 , CLA c:513 , MET z:19 , TYR z:27 , TRP z:33 , LYS z:37 , PHE z:41 , TRP z:47
binding site for residue LMG z 101
114
AY2
SOFTWARE
GLY a:74 , SER d:300 , ARG d:304 , GOL d:401 , VAL m:3 , HOH m:204 , HOH m:205 , HOH m:206
binding site for Di-peptide FME m 1 and GLU m 2
115
AY3
SOFTWARE
ALA v:36 , CYS v:37 , ALA v:38 , SER v:39 , HIS v:41 , VAL v:42 , ILE v:45 , THR v:46 , LYS v:47 , THR v:48 , LEU v:52 , ASP v:53 , LEU v:54 , THR v:58 , LEU v:59 , LEU v:72 , TYR v:75 , MET v:76 , TYR v:82 , HIS v:92 , PRO v:93 , ILE v:115 , ILE v:119 , HOH v:308 , HOH v:316 , HOH v:334 , HOH v:342
binding site for Di-peptide HEM v 201 and CYS v 40
116
AY4
SOFTWARE
PHE v:33 , ALA v:36 , ALA v:38 , SER v:39 , CYS v:40 , HIS v:41 , THR v:46 , THR v:48 , LEU v:52 , ASP v:53 , LEU v:54 , THR v:58 , LEU v:59 , LEU v:72 , TYR v:75 , MET v:76 , TYR v:82 , HIS v:92 , PRO v:93 , ILE v:115 , ILE v:119 , HOH v:308 , HOH v:316 , HOH v:334 , HOH v:342
binding site for Di-peptide HEM v 201 and CYS v 37
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain a
Chain b
Chain c
Chain d
Chain e
Chain f
Chain h
Chain i
Chain j
Chain k
Chain l
Chain m
Chain o
Chain t
Chain u
Chain v
Chain x
Chain y
Chain z
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (2.2 MB)
Header - Asym.Unit
Biol.Unit 1 (1.1 MB)
Header - Biol.Unit 1
Biol.Unit 2 (1.1 MB)
Header - Biol.Unit 2
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
5GTI
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help