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5GQU
Asym. Unit
Info
Asym.Unit (154 KB)
Biol.Unit 1 (147 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF BRANCHING ENZYME FROM CYANOTHECE SP. ATCC 51142
Authors
:
R. Suzuki, E. Suzuki
Date
:
08 Aug 16 (Deposition) - 22 Feb 17 (Release) - 12 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Branching Enzyme, Glycoside Hydrolase Family 13, Cyanobacteria, Starch, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Hayashi, R. Suzuki, C. Colleoni, S. G. Ball, N. Fujita, E. Suzuki
Bound Substrate In The Structure Of Cyanobacterial Branchin Enzyme Supports A New Mechanistic Model
J. Biol. Chem. V. 292 5465 2017
(for further references see the
PDB file header
)
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Hetero Components
(2, 11)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
7
Ligand/Ion
GLYCEROL
2
MG
4
Ligand/Ion
MAGNESIUM ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:573 , TYR A:576 , ARG A:580 , TYR A:714 , GLY A:715 , HOH A:902 , HOH A:967 , HOH A:997 , HOH A:1352
binding site for residue GOL A 801
02
AC2
SOFTWARE
TYR A:108 , THR A:110 , ASP A:111 , ASP A:525 , PHE A:528 , HOH A:910 , HOH A:1247 , HOH A:1353
binding site for residue GOL A 802
03
AC3
SOFTWARE
GLU A:705 , ASN A:718 , MET A:719 , GLY A:720 , ASN A:721 , LEU A:722 , HOH A:938 , HOH A:991 , HOH A:1043 , HOH A:1123
binding site for residue GOL A 803
04
AC4
SOFTWARE
TYR A:544 , PHE A:648 , GLU A:649 , TYR A:650 , HOH A:1452
binding site for residue GOL A 804
05
AC5
SOFTWARE
GLU A:448 , GLY A:449 , TRP A:451
binding site for residue GOL A 805
06
AC6
SOFTWARE
TYR A:441 , ASN A:443 , TYR A:444 , HOH A:1274 , HOH A:1495
binding site for residue GOL A 806
07
AC7
SOFTWARE
HIS A:19 , HIS A:516 , LEU A:519 , ASP A:520 , GLU A:556 , LYS A:567 , HOH A:1317
binding site for residue GOL A 807
08
AC8
SOFTWARE
HOH A:903 , HOH A:1049 , HOH A:1430 , HOH A:1577 , HOH A:1655 , HOH A:1665
binding site for residue MG A 808
09
AC9
SOFTWARE
ASP A:612 , HOH A:1096 , HOH A:1158 , HOH A:1264 , HOH A:1355 , HOH A:1512
binding site for residue MG A 809
10
AD1
SOFTWARE
HOH A:1008 , HOH A:1115 , HOH A:1135 , HOH A:1476 , HOH A:1600 , HOH A:1675
binding site for residue MG A 810
11
AD2
SOFTWARE
HOH A:924 , HOH A:1012 , HOH A:1194 , HOH A:1207 , HOH A:1574 , HOH A:1716
binding site for residue MG A 811
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (154 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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