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5FT8
Biol. Unit 1
Info
Asym.Unit (1.4 MB)
Biol.Unit 1 (375 KB)
Biol.Unit 2 (374 KB)
Biol.Unit 3 (367 KB)
Biol.Unit 4 (348 KB)
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Title
:
STRUCTURE OF A CYSTEINE DESULFURASE-SULFUR ACCEPTOR COMPLEX FROM ESCHERICHIA COLI AT 2.50 ANGSTROEM RESOLUTION
Authors
:
F. J. Fernandez, A. Arda, M. Lopez-Estepa, J. Aranda, E. Penya-Soler, F A. Round, R. Campos-Oliva, M. Bruix, M. Coll, I. Tunon, J. Jimenez-Bar M. C. Vega
Date
:
11 Jan 16 (Deposition) - 23 Nov 16 (Release) - 23 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Biol. Unit 3: I,J,K,L (1x)
Biol. Unit 4: M,N,O,P (1x)
Keywords
:
Transferase, L-Cysteine Desulfurase, Sulfur Acceptor, Transpersulfuration, Sulfur Trafficking
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. J. Fernandez, A. Arda, M. Lopez-Estepa, J. Aranda, E. Penya-Soler, F. Garces, J. F. Quintana, A. Round, R. Campos-Oliva, M. Bruix, M. Coll I. Tunon, J. Jimenez-Barbero, M. C. Vega
Mechanism Of Sulfur Transfer Across Protein-Protein Interfaces: The Cysteine Desulfurase Model System
Acs Catalysis V. 6 3975 2016
[
close entry info
]
Hetero Components
(4, 40)
Info
All Hetero Components
1a: S-MERCAPTOCYSTEINE (CSSa)
1b: S-MERCAPTOCYSTEINE (CSSb)
1c: S-MERCAPTOCYSTEINE (CSSc)
1d: S-MERCAPTOCYSTEINE (CSSd)
1e: S-MERCAPTOCYSTEINE (CSSe)
1f: S-MERCAPTOCYSTEINE (CSSf)
1g: S-MERCAPTOCYSTEINE (CSSg)
1h: S-MERCAPTOCYSTEINE (CSSh)
1i: S-MERCAPTOCYSTEINE (CSSi)
1j: S-MERCAPTOCYSTEINE (CSSj)
1k: S-MERCAPTOCYSTEINE (CSSk)
1l: S-MERCAPTOCYSTEINE (CSSl)
1m: S-MERCAPTOCYSTEINE (CSSm)
1n: S-MERCAPTOCYSTEINE (CSSn)
1o: S-MERCAPTOCYSTEINE (CSSo)
2a: GLYCEROL (GOLa)
2aa: GLYCEROL (GOLaa)
2ab: GLYCEROL (GOLab)
2ac: GLYCEROL (GOLac)
2ad: GLYCEROL (GOLad)
2ae: GLYCEROL (GOLae)
2af: GLYCEROL (GOLaf)
2ag: GLYCEROL (GOLag)
2ah: GLYCEROL (GOLah)
2ai: GLYCEROL (GOLai)
2aj: GLYCEROL (GOLaj)
2ak: GLYCEROL (GOLak)
2al: GLYCEROL (GOLal)
2am: GLYCEROL (GOLam)
2an: GLYCEROL (GOLan)
2ao: GLYCEROL (GOLao)
2ap: GLYCEROL (GOLap)
2aq: GLYCEROL (GOLaq)
2ar: GLYCEROL (GOLar)
2as: GLYCEROL (GOLas)
2at: GLYCEROL (GOLat)
2au: GLYCEROL (GOLau)
2av: GLYCEROL (GOLav)
2aw: GLYCEROL (GOLaw)
2ax: GLYCEROL (GOLax)
2ay: GLYCEROL (GOLay)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
2u: GLYCEROL (GOLu)
2v: GLYCEROL (GOLv)
2w: GLYCEROL (GOLw)
2x: GLYCEROL (GOLx)
2y: GLYCEROL (GOLy)
2z: GLYCEROL (GOLz)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
3c: DI(HYDROXYETHYL)ETHER (PEGc)
3d: DI(HYDROXYETHYL)ETHER (PEGd)
3e: DI(HYDROXYETHYL)ETHER (PEGe)
3f: DI(HYDROXYETHYL)ETHER (PEGf)
3g: DI(HYDROXYETHYL)ETHER (PEGg)
3h: DI(HYDROXYETHYL)ETHER (PEGh)
3i: DI(HYDROXYETHYL)ETHER (PEGi)
3j: DI(HYDROXYETHYL)ETHER (PEGj)
3k: DI(HYDROXYETHYL)ETHER (PEGk)
3l: DI(HYDROXYETHYL)ETHER (PEGl)
3m: DI(HYDROXYETHYL)ETHER (PEGm)
3n: DI(HYDROXYETHYL)ETHER (PEGn)
3o: DI(HYDROXYETHYL)ETHER (PEGo)
3p: DI(HYDROXYETHYL)ETHER (PEGp)
4a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
4b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
4c: PYRIDOXAL-5'-PHOSPHATE (PLPc)
4d: PYRIDOXAL-5'-PHOSPHATE (PLPd)
4e: PYRIDOXAL-5'-PHOSPHATE (PLPe)
4f: PYRIDOXAL-5'-PHOSPHATE (PLPf)
4g: PYRIDOXAL-5'-PHOSPHATE (PLPg)
4h: PYRIDOXAL-5'-PHOSPHATE (PLPh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CSS
4
Mod. Residue
S-MERCAPTOCYSTEINE
2
GOL
26
Ligand/Ion
GLYCEROL
3
PEG
8
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
[
close Hetero Component info
]
Sites
(42, 42)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: FC4 (SOFTWARE)
41: HC6 (SOFTWARE)
42: IC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:90 , THR A:91 , HIS A:119 , ASN A:171 , ASP A:196 , ALA A:198 , GLN A:199 , SER A:219 , HIS A:221 , LYS A:222 , HOH A:2058 , HOH A:2187 , THR C:273
BINDING SITE FOR RESIDUE PLP A1402
02
AC2
SOFTWARE
HIS A:119 , HIS A:120 , GLN A:356 , HIS A:357 , ALA A:359 , HOH A:2189 , GLY C:249 , LYS C:250
BINDING SITE FOR RESIDUE CSS A1403
03
AC3
SOFTWARE
GLN A:99 , ARG A:103 , PRO A:244 , TRP A:245 , GLN C:99 , ARG C:103 , MET C:128 , GLN C:132
BINDING SITE FOR RESIDUE PEG A1404
04
AC4
SOFTWARE
ARG A:60 , ALA A:63 , ARG A:64 , ALA A:67 , LYS A:71 , GLU A:287 , HOH A:2044
BINDING SITE FOR RESIDUE PEG A1405
05
AC5
SOFTWARE
GLN A:41 , SER A:44 , GLN A:54
BINDING SITE FOR RESIDUE PEG A1406
06
AC6
SOFTWARE
HIS A:187 , ASP A:212
BINDING SITE FOR RESIDUE GOL A1407
07
AC7
SOFTWARE
MET A:1 , VAL A:3 , GLN A:8 , ASP A:291 , TYR A:292
BINDING SITE FOR RESIDUE GOL A1408
08
AC8
SOFTWARE
GLU A:37 , GLN A:41 , GLU A:57
BINDING SITE FOR RESIDUE GOL A1409
09
AC9
SOFTWARE
LYS A:314 , ARG A:315 , HOH A:2152 , HOH A:2191
BINDING SITE FOR RESIDUE GOL A1410
10
BC1
SOFTWARE
ASN A:143 , GLN A:145 , ASP A:149 , ASP A:151
BINDING SITE FOR RESIDUE GOL A1411
11
BC2
SOFTWARE
PHE A:42 , THR A:62
BINDING SITE FOR RESIDUE GOL A1412
12
BC3
SOFTWARE
THR A:306 , GLU A:309 , ASP A:310 , ASP A:325 , GOL A:1414 , HOH A:2161
BINDING SITE FOR RESIDUE GOL A1413
13
BC4
SOFTWARE
GLU A:309 , ASP A:310 , ALA A:313 , GOL A:1413 , HOH A:2195
BINDING SITE FOR RESIDUE GOL A1414
14
BC5
SOFTWARE
ALA A:364 , GLU A:365 , LEU A:366 , GLY A:367
BINDING SITE FOR RESIDUE GOL A1415
15
BC6
SOFTWARE
GLN A:74
BINDING SITE FOR RESIDUE GOL A1416
16
BC7
SOFTWARE
ASP A:258
BINDING SITE FOR RESIDUE GOL A2401
17
BC8
SOFTWARE
GLY A:355 , GLN A:356 , HOH A:2171 , HOH A:2188 , GLY B:60 , GLU B:62 , ASN B:63
BINDING SITE FOR RESIDUE CSS B1152
18
BC9
SOFTWARE
SER B:126 , ALA B:127 , SER B:128 , ARG B:129 , SER B:130 , GLN B:131 , GLU G:155
BINDING SITE FOR RESIDUE PEG B1153
19
CC1
SOFTWARE
SER B:111 , HOH B:2038
BINDING SITE FOR RESIDUE GOL B1154
20
CC2
SOFTWARE
GLU A:347 , TRP B:30 , HOH B:2056
BINDING SITE FOR RESIDUE GOL B1155
21
CC3
SOFTWARE
THR A:273 , HOH A:2133 , THR C:90 , THR C:91 , HIS C:119 , ASN C:171 , ASP C:196 , ALA C:198 , GLN C:199 , SER C:219 , HIS C:221 , LYS C:222 , HOH C:2012 , HOH C:2040
BINDING SITE FOR RESIDUE PLP C1402
22
CC4
SOFTWARE
GLY A:249 , HIS C:119 , HIS C:120 , GLN C:356 , HIS C:357 , ALA C:359
BINDING SITE FOR RESIDUE CSS C1403
23
CC5
SOFTWARE
THR C:261 , HOH C:2094
BINDING SITE FOR RESIDUE PEG C1404
24
CC6
SOFTWARE
VAL C:137 , VAL C:138 , PEG C:1406 , HOH C:2053
BINDING SITE FOR RESIDUE PEG C1405
25
CC7
SOFTWARE
GLU C:111 , PEG C:1405 , HOH C:2053
BINDING SITE FOR RESIDUE PEG C1406
26
CC8
SOFTWARE
GLN C:74 , GOL C:1411 , HOH C:2130 , HOH C:2131
BINDING SITE FOR RESIDUE PEG C1407
27
CC9
SOFTWARE
GLU C:240 , HOH C:2085 , SER I:188
BINDING SITE FOR RESIDUE GOL C1408
28
DC1
SOFTWARE
THR C:62 , GOL C:1410
BINDING SITE FOR RESIDUE GOL C1409
29
DC2
SOFTWARE
GOL C:1409
BINDING SITE FOR RESIDUE GOL C1410
30
DC3
SOFTWARE
GLU C:70 , GLN C:74 , ASN C:77 , ALA C:78 , PRO C:79 , PEG C:1407 , HOH C:2130
BINDING SITE FOR RESIDUE GOL C1411
31
DC4
SOFTWARE
PRO C:316
BINDING SITE FOR RESIDUE GOL C1412
32
DC5
SOFTWARE
ALA C:364 , GLY C:367
BINDING SITE FOR RESIDUE GOL C1413
33
DC6
SOFTWARE
PRO C:108 , GLN I:107 , PRO I:108
BINDING SITE FOR RESIDUE GOL C1414
34
DC7
SOFTWARE
GLY C:367 , THR C:369 , HOH C:2111 , HOH C:2121
BINDING SITE FOR RESIDUE GOL C1415
35
DC8
SOFTWARE
GLU C:309 , ASP C:310 , ASP C:325
BINDING SITE FOR RESIDUE GOL C1416
36
DC9
SOFTWARE
TYR C:65 , ARG C:69 , TRP C:86
BINDING SITE FOR RESIDUE GOL C1417
37
EC1
SOFTWARE
VAL A:137 , ASP C:258 , GLU F:18 , ARG F:21
BINDING SITE FOR RESIDUE GOL C1418
38
EC2
SOFTWARE
ALA C:354 , GLY D:60 , GLU D:62 , ASN D:63
BINDING SITE FOR RESIDUE CSS D1152
39
EC3
SOFTWARE
LEU D:27 , LYS D:33 , GLU D:118 , LEU D:119 , GLY D:120 , LYS E:136
BINDING SITE FOR RESIDUE GOL D1153
40
FC4
SOFTWARE
GLN A:59 , PRO E:104 , ARG E:105 , GLN E:107
BINDING SITE FOR RESIDUE GOL E1411
41
HC6
SOFTWARE
GLN A:17 , ARG C:52 , SER C:53 , GLN H:146 , LYS H:148
BINDING SITE FOR RESIDUE GOL H1153
42
IC4
SOFTWARE
HOH C:2079 , LYS I:235 , GLU I:237
BINDING SITE FOR RESIDUE GOL I1408
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Pfam Domains
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Asym.Unit (1.4 MB)
Header - Asym.Unit
Biol.Unit 1 (375 KB)
Header - Biol.Unit 1
Biol.Unit 2 (374 KB)
Header - Biol.Unit 2
Biol.Unit 3 (367 KB)
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