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5FQM
Biol. Unit 1
Info
Asym.Unit (101 KB)
Biol.Unit 1 (94 KB)
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(1)
Title
:
LAST COMMON ANCESTOR OF GRAM NEGATIVE BACTERIA (GNCA) CLASS A BETA-LACTAMASE
Authors
:
S. Martinez Rodriguez, J. A. Gavira, V. A. Risso, J. M. Sanchez Ruiz
Date
:
12 Dec 15 (Deposition) - 18 Jan 17 (Release) - 18 Jan 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Precambrian, Resurrected Beta-Lactamase, Gnca
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. A. Risso, S. Martinez-Rodriguez, A. M. Candela, D. Pantoja-Uceda, M. Ortega-Munoz, F. Santoyo-Gonzalez, E. A. Gaucher, M. Bruix, J. A. Gavira, J. M. Sanchez-Ruiz
Back And To The Future: Facile Generation Of Efficient De Novo Catalysis In Laboratory Resurrections Of Precambrian Proteins
To Be Published
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
1k: GLYCEROL (GOLk)
2a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
11
Ligand/Ion
GLYCEROL
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:70 , LYS A:88 , SER A:130 , THR A:235 , GLY A:236 , THR A:237 , HOH A:2088 , HOH A:2146 , HOH A:2169
BINDING SITE FOR RESIDUE SO4 A1293
02
AC2
SOFTWARE
GLN A:86 , PHE A:151 , SER A:154 , ILE A:155 , GLU A:171 , HOH A:2196 , HOH A:2197 , HOH A:2298 , HOH A:2299
BINDING SITE FOR RESIDUE GOL A1294
03
AC3
SOFTWARE
LYS A:215 , THR A:216 , GLY A:217 , ASP A:218
BINDING SITE FOR RESIDUE GOL A1295
04
AC4
SOFTWARE
ARG A:161 , GOL A:1304 , HOH A:2302
BINDING SITE FOR RESIDUE GOL A1296
05
AC5
SOFTWARE
ILE A:155 , GLU A:171 , ALA A:173 , THR A:192 , HIS A:241 , HOH A:2197 , HOH A:2303
BINDING SITE FOR RESIDUE GOL A1297
06
AC6
SOFTWARE
ARG A:43 , ARG A:65 , PRO A:67 , PRO A:174 , GLY A:175 , ASP A:176 , HOH A:2025 , HOH A:2201 , HOH A:2304 , HOH A:2305
BINDING SITE FOR RESIDUE GOL A1298
07
AC7
SOFTWARE
ILE A:155 , ASP A:157 , ALA A:185 , ALA A:188 , THR A:189 , THR A:192
BINDING SITE FOR RESIDUE GOL A1299
08
AC8
SOFTWARE
ALA A:120 , GLU A:124 , GLN A:206 , TRP A:210 , ASP A:228 , HOH A:2163 , HOH A:2307
BINDING SITE FOR RESIDUE GOL A1300
09
AC9
SOFTWARE
ASP A:197 , SER A:200 , PRO A:201 , HIS A:241 , GLY A:242 , SER A:268 , GLN A:269 , HOH A:2220 , HOH A:2266 , HOH A:2274 , HOH A:2308
BINDING SITE FOR RESIDUE GOL A1301
10
BC1
SOFTWARE
LEU A:102 , VAL A:103 , ASP A:104 , ALA A:146 , ALA A:147 , ALA A:150 , PRO A:167 , HOH A:2179 , HOH A:2180 , HOH A:2309
BINDING SITE FOR RESIDUE GOL A1302
11
BC2
SOFTWARE
ALA A:58 , TYR A:60 , ARG A:61 , GLY A:62 , HOH A:2004 , HOH A:2005 , HOH A:2071
BINDING SITE FOR RESIDUE GOL A1303
12
BC3
SOFTWARE
ARG A:153 , ARG A:161 , ASP A:163 , GOL A:1296
BINDING SITE FOR RESIDUE GOL A1304
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Atom Selection
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Chain A
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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Asym.Unit (101 KB)
Header - Asym.Unit
Biol.Unit 1 (94 KB)
Header - Biol.Unit 1
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