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5FQI
Asym. Unit
Info
Asym.Unit (101 KB)
Biol.Unit 1 (94 KB)
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(1)
Title
:
W229D AND F290W MUTANT OF THE LAST COMMON ANCESTOR OF GRAM-NEGATIVE BACTERIA (GNCA4) BETA-LACTAMASE CLASS A
Authors
:
J. A. Gavira, V. A. Risso, S. Martinez-Rodriguez, J. M. Sanchez-Ruiz
Date
:
11 Dec 15 (Deposition) - 21 Dec 16 (Release) - 21 Dec 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Precambrian, Resurrected Beta-Lactamase, Gnca4
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. A. Risso, S. Martinez-Rodriguez, A. M. Candel, D. Pantoja, M. Ortega-Munoz, F. Santoyo-Gonzalez, E. Gaucher, M. Bruix, J. A. Gavira, J. M. Sanchez-Ruiz
Back And To The Future: Facile Generation Of Efficient De Novo Catalysis In Laboratory Resurrections Of Precambrian Proteins
To Be Published
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Hetero Components
(6, 16)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
4a: 2-(2-METHOXYETHOXY)ETHANOL (PG0a)
5a: TETRAETHYLENE GLYCOL (PG4a)
6a: TRIETHYLENE GLYCOL (PGEa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
9
Ligand/Ion
1,2-ETHANEDIOL
2
GOL
3
Ligand/Ion
GLYCEROL
3
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PG0
1
Ligand/Ion
2-(2-METHOXYETHOXY)ETHANOL
5
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
6
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:96 , GLU A:140 , EDO A:1305 , HOH A:2167
BINDING SITE FOR RESIDUE GOL A1294
02
AC2
SOFTWARE
ALA A:47 , VAL A:48 , ARG A:56 , PHE A:57 , ALA A:184 , ALA A:188 , HOH A:2183
BINDING SITE FOR RESIDUE GOL A1295
03
AC3
SOFTWARE
LYS A:111 , HIS A:112 , GLY A:156 , ASP A:157 , ASN A:158 , ALA A:185 , HOH A:2030 , HOH A:2079 , HOH A:2184
BINDING SITE FOR RESIDUE GOL A1296
04
AC4
SOFTWARE
LEU A:91 , ALA A:202 , SER A:203
BINDING SITE FOR RESIDUE EDO A1297
05
AC5
SOFTWARE
SER A:70 , LYS A:73 , ASN A:132 , ASN A:170 , HOH A:2037 , HOH A:2038
BINDING SITE FOR RESIDUE EDO A1298
06
AC6
SOFTWARE
ARG A:65 , GLU A:110 , LYS A:111 , ASN A:158 , HOH A:2032
BINDING SITE FOR RESIDUE EDO A1299
07
AC7
SOFTWARE
ASP A:197 , HOH A:2185
BINDING SITE FOR RESIDUE EDO A1300
08
AC8
SOFTWARE
ALA A:289 , TRP A:290 , HIS A:292
BINDING SITE FOR RESIDUE EDO A1301
09
AC9
SOFTWARE
ARG A:43 , ARG A:65 , PRO A:67 , GLY A:175 , ASP A:176 , HOH A:2010 , HOH A:2118
BINDING SITE FOR RESIDUE EDO A1302
10
BC1
SOFTWARE
ARG A:94 , ASP A:115 , GLY A:116 , GLU A:121
BINDING SITE FOR RESIDUE EDO A1303
11
BC2
SOFTWARE
GLN A:205 , ARG A:230
BINDING SITE FOR RESIDUE EDO A1304
12
BC3
SOFTWARE
ARG A:93 , GLU A:140 , GOL A:1294 , HOH A:2054 , HOH A:2057
BINDING SITE FOR RESIDUE EDO A1305
13
BC4
SOFTWARE
ARG A:39 , ASN A:90 , GLN A:269 , HOH A:2187
BINDING SITE FOR RESIDUE PEG A1307
14
BC5
SOFTWARE
LYS A:38 , ASP A:218 , LYS A:219 , HOH A:2174
BINDING SITE FOR RESIDUE PG4 A1308
15
BC6
SOFTWARE
PRO A:174 , LEU A:194 , LEU A:195 , ARG A:204 , GLN A:205
BINDING SITE FOR RESIDUE PGE A1309
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(0, 0)
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Atom Selection
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Protein
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Protein & NOT Variant
Protein & NOT Site
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Chain A
Asymmetric Unit 1
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Asym.Unit (101 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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