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Biol. Unit 1
Info
Asym.Unit (167 KB)
Biol.Unit 1 (82 KB)
Biol.Unit 2 (82 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM-2 WITH 2C
Authors
:
J. Brem, R. Cain, M. A. Mcdonough, I. J. Clifton, C. W. G. Fishwick, C. J. S
Date
:
08 Dec 15 (Deposition) - 17 Aug 16 (Release) - 17 Aug 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Antibiotic Resistance
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Brem, R. Cain, S. Cahill, M. A. Mcdonough, I. J. Clifton, J. -C. Jimenez-Castellanos, M. B. Avison, J. Spencer, C. W. G. Fishwick, C. J. Schofield
Structural Basis Of Metallo-Beta-Lactamase, Serine-Beta-Lactamase, And Penicillin Binding Protein Inhibition By Cyclic Boronates
Nat. Commun. V. 7 12406 2016
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: DIMETHYL SULFOXIDE (DMSa)
2a: FORMIC ACID (FMTa)
2b: FORMIC ACID (FMTb)
2c: FORMIC ACID (FMTc)
2d: FORMIC ACID (FMTd)
3a: (R)-3-(4-(AMINOMETHYL)BENZAMIDO)-8... (OK3a)
3b: (R)-3-(4-(AMINOMETHYL)BENZAMIDO)-8... (OK3b)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
4e: ZINC ION (ZNe)
4f: ZINC ION (ZNf)
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No.
Name
Count
Type
Full Name
1
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
2
FMT
2
Ligand/Ion
FORMIC ACID
3
OK3
1
Ligand/Ion
(R)-3-(4-(AMINOMETHYL)BENZAMIDO)-8-CARBOXY-2,2-DIHYDROXY-3,4-DIHYDRO-2H-BENZO[E][1,2]OXABORININ-2-UIDE
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:132 , THR A:133 , THR A:152 , HIS A:153 , HIS A:251 , FMT A:401 , ZN A:502 , HOH A:2095
BINDING SITE FOR RESIDUE FMT A 400
2
AC2
SOFTWARE
ALA A:132 , HIS A:153 , HIS A:251 , ASN A:254 , FMT A:400 , ZN A:502 , HOH A:2096
BINDING SITE FOR RESIDUE FMT A 401
3
AC3
SOFTWARE
HIS A:114 , HIS A:116 , HIS A:179 , OK3 A:600
BINDING SITE FOR RESIDUE ZN A 500
4
AC4
SOFTWARE
ASP A:118 , CYS A:198 , HIS A:240 , OK3 A:600
BINDING SITE FOR RESIDUE ZN A 501
5
AC5
SOFTWARE
HIS A:153 , HIS A:251 , FMT A:400 , FMT A:401
BINDING SITE FOR RESIDUE ZN A 502
6
AC6
SOFTWARE
TRP A:87 , HIS A:114 , HIS A:116 , ASP A:118 , GLU A:146 , HIS A:179 , CYS A:198 , GLY A:209 , ASN A:210 , HIS A:240 , ZN A:500 , ZN A:501 , HOH A:2047 , HOH A:2081 , HOH A:2148 , HOH A:2156
BINDING SITE FOR RESIDUE OK3 A 600
7
AC7
SOFTWARE
PRO A:106 , VAL A:107 , ALA A:129 , HOH A:2057
BINDING SITE FOR RESIDUE DMS A 700
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (167 KB)
Header - Asym.Unit
Biol.Unit 1 (82 KB)
Header - Biol.Unit 1
Biol.Unit 2 (82 KB)
Header - Biol.Unit 2
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