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5FO8
Asym. Unit
Info
Asym.Unit (571 KB)
Biol.Unit 1 (559 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN COMPLEMENT C3B IN COMPLEX WITH MCP (CCP1-4)
Authors
:
F. Forneris, J. Wu, X. Xue, P. Gros
Date
:
18 Nov 15 (Deposition) - 06 Apr 16 (Release) - 01 Jun 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Lipid Binding, Lipid Bianding, Complement System, Immune System, Plasma Protein, Cofa Activity, Regulators Of Complement Activity
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Forneris, J. Wu, X. Xue, D. Ricklin, Z. Lin, G. Sfyroera, A. Tzekou, E. Volokhina, J. C. Granneman, R. Hauhart, P. Bertram, M. K. Liszewski J. P. Atkinson, J. D. Lambris, P. Gros
Regulators Of Complement Activity Mediate Inhibitory Mechanisms Through A Common C3B-Binding Mode.
Embo J. V. 35 1133 2016
[
close entry info
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Hetero Components
(3, 37)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
2a: 1,2-ETHANEDIOL (EDOa)
2aa: 1,2-ETHANEDIOL (EDOaa)
2ab: 1,2-ETHANEDIOL (EDOab)
2ac: 1,2-ETHANEDIOL (EDOac)
2ad: 1,2-ETHANEDIOL (EDOad)
2ae: 1,2-ETHANEDIOL (EDOae)
2af: 1,2-ETHANEDIOL (EDOaf)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
2r: 1,2-ETHANEDIOL (EDOr)
2s: 1,2-ETHANEDIOL (EDOs)
2t: 1,2-ETHANEDIOL (EDOt)
2u: 1,2-ETHANEDIOL (EDOu)
2v: 1,2-ETHANEDIOL (EDOv)
2w: 1,2-ETHANEDIOL (EDOw)
2x: 1,2-ETHANEDIOL (EDOx)
2y: 1,2-ETHANEDIOL (EDOy)
2z: 1,2-ETHANEDIOL (EDOz)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
EDO
32
Ligand/Ion
1,2-ETHANEDIOL
3
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
close Hetero Component info
]
Sites
(34, 34)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LEU B:1183 , GLN B:1184 , LYS B:1209 , THR B:1213
BINDING SITE FOR RESIDUE EDO B2664
02
AC2
SOFTWARE
GLU B:1221 , GLY B:1224 , ASN B:1229
BINDING SITE FOR RESIDUE EDO B2665
03
AC3
SOFTWARE
LEU B:1211 , PHE B:1248 , HOH B:2190 , HOH B:2207
BINDING SITE FOR RESIDUE EDO B2666
04
AC4
SOFTWARE
THR B:1006 , PRO B:1007 , SER B:1008 , GLU B:1013 , GLY B:1017 , EDO B:2676
BINDING SITE FOR RESIDUE EDO B2667
05
AC5
SOFTWARE
GLY B:1038 , GLU B:1040 , LYS B:1041 , EDO B:2669
BINDING SITE FOR RESIDUE EDO B2668
06
AC6
SOFTWARE
GLU B:1035 , EDO B:2668
BINDING SITE FOR RESIDUE EDO B2669
07
AC7
SOFTWARE
PRO A:63 , ARG B:1042 , LEU B:1046 , LEU B:1092 , PHE C:242
BINDING SITE FOR RESIDUE EDO B2670
08
AC8
SOFTWARE
HIS A:356 , THR A:358 , ARG A:439 , HOH A:2096
BINDING SITE FOR RESIDUE EDO A1666
09
AC9
SOFTWARE
LEU B:1356 , ASN B:1359 , GLU B:1486 , GLU B:1487
BINDING SITE FOR RESIDUE EDO B2671
10
BC1
SOFTWARE
ASN B:1257 , GLU B:1258 , EDO B:2691
BINDING SITE FOR RESIDUE EDO B2672
11
BC2
SOFTWARE
GLN B:1061 , VAL B:1070 , LYS B:1071 , ARG B:1072 , ALA B:1073 , HOH B:2287
BINDING SITE FOR RESIDUE EDO B2673
12
BC3
SOFTWARE
ASP B:1121 , HOH B:2110
BINDING SITE FOR RESIDUE EDO B2674
13
BC4
SOFTWARE
LYS B:1041 , GLY B:1044 , ALA B:1045 , LEU B:1048 , EDO B:2689
BINDING SITE FOR RESIDUE EDO B2675
14
BC5
SOFTWARE
GLU B:1013 , THR B:1528 , LYS B:1644 , HOH B:2253 , EDO B:2667
BINDING SITE FOR RESIDUE EDO B2676
15
BC6
SOFTWARE
MET B:1181 , ASN B:1182 , HOH B:2174
BINDING SITE FOR RESIDUE EDO B2677
16
BC7
SOFTWARE
GLU B:1138 , MET B:1141 , ASN B:1179 , ASN B:1182 , HOH B:2153 , EDO B:2679
BINDING SITE FOR RESIDUE EDO B2678
17
BC8
SOFTWARE
ARG B:999 , ASP B:1140 , PHE B:1175 , EDO B:2678
BINDING SITE FOR RESIDUE EDO B2679
18
BC9
SOFTWARE
LYS B:1546 , GLN B:1567 , GLY B:1650 , THR B:1653 , HOH B:2283
BINDING SITE FOR RESIDUE EDO B2680
19
CC1
SOFTWARE
LYS B:1546 , HIS B:1601 , TRP B:1631 , PRO B:1632 , GLU B:1633
BINDING SITE FOR RESIDUE EDO B2681
20
CC2
SOFTWARE
ASN A:85 , NAG A:1063
BINDING SITE FOR RESIDUE EDO A1667
21
CC3
SOFTWARE
THR B:946 , ASP B:948 , ARG B:951 , GLN B:1339 , HOH B:2233
BINDING SITE FOR RESIDUE EDO B2682
22
CC4
SOFTWARE
GLU B:1032 , GLN B:1033 , TRP B:1034 , GLU B:1035 , HOH B:2086
BINDING SITE FOR RESIDUE EDO B2683
23
CC5
SOFTWARE
TRP B:1077 , GLU B:1120 , PRO B:1123 , VAL B:1124 , GLN B:1127 , ILE B:1130
BINDING SITE FOR RESIDUE EDO B2684
24
CC6
SOFTWARE
GLY A:160 , GLN A:183 , ASN A:184 , LEU A:186
BINDING SITE FOR RESIDUE EDO A1668
25
CC7
SOFTWARE
PRO B:1020 , GLY B:1265 , HOH B:2222 , HOH B:2288
BINDING SITE FOR RESIDUE EDO B2685
26
CC8
SOFTWARE
LYS B:1105 , GLN B:1161 , VAL B:1162 , ASN B:1163
BINDING SITE FOR RESIDUE EDO B2686
27
CC9
SOFTWARE
ILE B:1125 , GLN B:1127 , GLU B:1128 , TYR B:1266 , GLN B:1647 , ASP B:1648
BINDING SITE FOR RESIDUE EDO B2687
28
DC1
SOFTWARE
MET B:1199 , GLY B:1200 , LYS B:1203 , ASP B:1639
BINDING SITE FOR RESIDUE EDO B2688
29
DC2
SOFTWARE
GLU B:1040 , LYS B:1041 , GLY B:1044 , HOH B:2293 , EDO B:2675
BINDING SITE FOR RESIDUE EDO B2689
30
DC3
SOFTWARE
VAL B:995 , LEU B:1256 , ASN B:1257 , ARG B:1260 , TYR B:1261 , HOH B:2213
BINDING SITE FOR RESIDUE EDO B2690
31
DC4
SOFTWARE
ASP B:993 , TYR B:1262 , HOH B:2068 , HOH B:2213 , EDO B:2672
BINDING SITE FOR RESIDUE EDO B2691
32
DC5
SOFTWARE
GLY A:393 , THR A:396
BINDING SITE FOR RESIDUE EDO A1669
33
DC6
SOFTWARE
ASN A:85 , LEU A:501 , LYS A:502 , ALA A:503 , EDO A:1667
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A1063 THROUGH NAG A1064 BOUND TO ASN A 85
34
DC7
SOFTWARE
ASN B:939
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG B1939 THROUGH BMA B1941 BOUND TO ASN B 939
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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Sorry, no Info available
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
[
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Asymmetric Unit 1
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