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5FLI
Asym. Unit
Info
Asym.Unit (392 KB)
Biol.Unit 1 (70 KB)
Biol.Unit 2 (71 KB)
Biol.Unit 3 (70 KB)
Biol.Unit 4 (70 KB)
Biol.Unit 5 (71 KB)
Biol.Unit 6 (70 KB)
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(1)
Title
:
ENZYME-SUBSTRATE COMPLEX OF NI-QUERCETINASE
Authors
:
J. -H. Jeoung, D. Nianios, S. Fetzner, H. Dobbek
Date
:
26 Oct 15 (Deposition) - 01 Jun 16 (Release) - 24 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: K,L (1x)
Biol. Unit 2: E,F (1x)
Biol. Unit 3: G,H (1x)
Biol. Unit 4: I,J (1x)
Biol. Unit 5: B,C (1x)
Biol. Unit 6: A,D (1x)
Keywords
:
Oxidoreductase, Dioxygenase, Nickel, Quercetin, Streptomyces, Ni- Quuercetinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Wang, L. Moynie, P. J. Harrison, V. Kelly, A. Piper, J. H. Naismith, D. J. Campopiano
Using The Pimeloyl-Coa Synthetase Adenylation Fold To Synthesize Fatty Acid Thioesters.
Nat. Chem. Biol. V. 13 660 2017
[
close entry info
]
Hetero Components
(2, 23)
Info
All Hetero Components
1a: NICKEL (II) ION (NIa)
1b: NICKEL (II) ION (NIb)
1c: NICKEL (II) ION (NIc)
1d: NICKEL (II) ION (NId)
1e: NICKEL (II) ION (NIe)
1f: NICKEL (II) ION (NIf)
1g: NICKEL (II) ION (NIg)
1h: NICKEL (II) ION (NIh)
1i: NICKEL (II) ION (NIi)
1j: NICKEL (II) ION (NIj)
1k: NICKEL (II) ION (NIk)
1l: NICKEL (II) ION (NIl)
2a: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEa)
2b: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEb)
2c: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEc)
2d: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEd)
2e: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEe)
2f: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEf)
2g: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEg)
2h: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEh)
2i: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEi)
2j: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEj)
2k: 3,5,7,3',4'-PENTAHYDROXYFLAVONE (QUEk)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NI
12
Ligand/Ion
NICKEL (II) ION
2
QUE
11
Ligand/Ion
3,5,7,3',4'-PENTAHYDROXYFLAVONE
[
close Hetero Component info
]
Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:69 , HIS A:71 , GLU A:76 , HIS A:115 , QUE A:301 , HOH A:2046
BINDING SITE FOR RESIDUE NI A 300
02
AC2
SOFTWARE
LEU A:35 , CYS A:58 , HIS A:69 , HIS A:71 , GLU A:76 , VAL A:77 , GLY A:128 , PHE A:137 , PHE A:140 , PHE A:141 , PHE A:176 , NI A:300 , HOH A:2030 , HOH A:2046 , HOH A:2094
BINDING SITE FOR RESIDUE QUE A 301
03
AC3
SOFTWARE
HIS B:69 , HIS B:71 , GLU B:76 , HIS B:115 , QUE B:301 , HOH B:2043
BINDING SITE FOR RESIDUE NI B 300
04
AC4
SOFTWARE
LEU B:35 , CYS B:58 , ILE B:66 , HIS B:69 , HIS B:71 , GLU B:76 , VAL B:77 , VAL B:126 , VAL B:127 , GLY B:128 , PHE B:140 , PHE B:141 , NI B:300 , HOH B:2043
BINDING SITE FOR RESIDUE QUE B 301
05
AC5
SOFTWARE
HIS C:69 , HIS C:71 , GLU C:76 , HIS C:115 , QUE C:301 , HOH C:2033
BINDING SITE FOR RESIDUE NI C 300
06
AC6
SOFTWARE
LEU C:35 , CYS C:58 , HIS C:69 , HIS C:71 , GLU C:76 , VAL C:77 , TYR C:117 , VAL C:126 , GLY C:128 , VAL C:129 , PHE C:140 , PHE C:141 , PHE C:176 , NI C:300 , HOH C:2033
BINDING SITE FOR RESIDUE QUE C 301
07
AC7
SOFTWARE
HIS D:69 , HIS D:71 , GLU D:76 , HIS D:115 , QUE D:301 , HOH D:2033
BINDING SITE FOR RESIDUE NI D 300
08
AC8
SOFTWARE
LEU D:35 , PHE D:36 , ILE D:66 , HIS D:69 , HIS D:71 , GLU D:76 , VAL D:77 , TYR D:117 , VAL D:126 , VAL D:127 , GLY D:128 , PHE D:137 , PHE D:140 , PHE D:141 , PHE D:176 , NI D:300 , HOH D:2020 , HOH D:2033
BINDING SITE FOR RESIDUE QUE D 301
09
AC9
SOFTWARE
HIS E:69 , HIS E:71 , GLU E:76 , HIS E:115 , QUE E:301 , HOH E:2047
BINDING SITE FOR RESIDUE NI E 300
10
BC1
SOFTWARE
LEU E:35 , PHE E:36 , HIS E:69 , HIS E:71 , GLU E:76 , VAL E:77 , TYR E:117 , VAL E:126 , GLY E:128 , PHE E:137 , PHE E:140 , PHE E:141 , PHE E:176 , NI E:300 , HOH E:2028 , HOH E:2047
BINDING SITE FOR RESIDUE QUE E 301
11
BC2
SOFTWARE
HIS F:69 , HIS F:71 , GLU F:76 , HIS F:115 , QUE F:301 , HOH F:2032
BINDING SITE FOR RESIDUE NI F 300
12
BC3
SOFTWARE
LEU F:35 , PHE F:36 , PHE F:56 , CYS F:58 , ILE F:66 , HIS F:69 , HIS F:71 , GLU F:76 , VAL F:77 , TYR F:117 , VAL F:126 , GLY F:128 , PHE F:137 , PHE F:140 , PHE F:141 , VAL F:174 , PHE F:176 , NI F:300 , HOH F:2018 , HOH F:2032
BINDING SITE FOR RESIDUE QUE F 301
13
BC4
SOFTWARE
HIS G:69 , HIS G:71 , GLU G:76 , HIS G:115 , QUE G:301 , HOH G:2033
BINDING SITE FOR RESIDUE NI G 300
14
BC5
SOFTWARE
LEU G:35 , CYS G:58 , HIS G:69 , HIS G:71 , GLU G:76 , VAL G:77 , PHE G:78 , VAL G:126 , VAL G:127 , GLY G:128 , PHE G:137 , PHE G:140 , PHE G:141 , PHE G:176 , NI G:300 , HOH G:2019
BINDING SITE FOR RESIDUE QUE G 301
15
BC6
SOFTWARE
HIS H:69 , HIS H:71 , GLU H:76 , HIS H:115 , QUE H:301 , HOH H:2048
BINDING SITE FOR RESIDUE NI H 300
16
BC7
SOFTWARE
LEU H:35 , PHE H:36 , HIS H:69 , HIS H:71 , GLU H:76 , VAL H:77 , PHE H:78 , TYR H:117 , VAL H:126 , GLY H:128 , PHE H:137 , PHE H:140 , PHE H:141 , VAL H:174 , PHE H:176 , NI H:300 , HOH H:2030 , HOH H:2048
BINDING SITE FOR RESIDUE QUE H 301
17
BC8
SOFTWARE
HIS I:69 , HIS I:71 , GLU I:76 , HIS I:115 , HOH I:2040 , HOH I:2041
BINDING SITE FOR RESIDUE NI I 300
18
BC9
SOFTWARE
HIS J:69 , HIS J:71 , GLU J:76 , HIS J:115 , QUE J:301 , HOH J:2035
BINDING SITE FOR RESIDUE NI J 300
19
CC1
SOFTWARE
LEU J:35 , PHE J:36 , CYS J:58 , ILE J:66 , HIS J:69 , HIS J:71 , GLU J:76 , VAL J:77 , PHE J:78 , TYR J:117 , VAL J:126 , GLY J:128 , PHE J:137 , PHE J:140 , PHE J:141 , PHE J:176 , NI J:300 , HOH J:2022 , HOH J:2035
BINDING SITE FOR RESIDUE QUE J 301
20
CC2
SOFTWARE
HIS K:69 , HIS K:71 , GLU K:76 , HIS K:115 , QUE K:301 , HOH K:2036
BINDING SITE FOR RESIDUE NI K 300
21
CC3
SOFTWARE
HIS K:69 , HIS K:71 , GLU K:76 , VAL K:77 , TYR K:117 , VAL K:126 , VAL K:127 , GLY K:128 , VAL K:129 , PHE K:137 , PHE K:140 , PHE K:141 , PHE K:176 , NI K:300 , HOH K:2036
BINDING SITE FOR RESIDUE QUE K 301
22
CC4
SOFTWARE
HIS L:69 , HIS L:71 , GLU L:76 , HIS L:115 , QUE L:301 , HOH L:2039
BINDING SITE FOR RESIDUE NI L 300
23
CC5
SOFTWARE
LEU L:35 , PHE L:36 , PHE L:56 , HIS L:69 , HIS L:71 , GLU L:76 , VAL L:77 , TYR L:117 , VAL L:126 , GLY L:128 , PHE L:137 , PHE L:140 , PHE L:141 , PHE L:176 , NI L:300 , HOH L:2025 , HOH L:2039
BINDING SITE FOR RESIDUE QUE L 301
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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