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5FKJ
Asym. Unit
Info
Asym.Unit (734 KB)
Biol.Unit 1 (362 KB)
Biol.Unit 2 (370 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE ACETYLCHOLINESTERASE IN COMPLEX WITH C-547, AN ALKYL AMMONIUM DERIVATIVE OF 6-METHYL URACIL
Authors
:
F. Nachon, M. Villard-Wandhammer, K. Petrov, P. Masson
Date
:
16 Oct 15 (Deposition) - 16 Mar 16 (Release) - 11 May 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.13
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: C,D (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Hydrolase, Acetylcholinesterase, C-547
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. D. Kharlamova, S. V. Lushchekina, K. A. Petrov, E. D. Kots, F. V. Nachon, M. Villard-Wandhammer, I. V. Zueva, E. Krejci, V. S. Reznik, V. V. Zobov, E. E. Nikolsky, P. Masson
Slow-Binding Inhibition Of Acetylcholinesterase By A 6- Methyluracil Alkyl-Ammonium Derivative: Mechanism And Advantages For Myasthenia Gravis Treatment.
Biochem. J. V. 473 1225 2016
[
close entry info
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Hetero Components
(4, 41)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1aa: CHLORIDE ION (CLaa)
1ab: CHLORIDE ION (CLab)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
1n: CHLORIDE ION (CLn)
1o: CHLORIDE ION (CLo)
1p: CHLORIDE ION (CLp)
1q: CHLORIDE ION (CLq)
1r: CHLORIDE ION (CLr)
1s: CHLORIDE ION (CLs)
1t: CHLORIDE ION (CLt)
1u: CHLORIDE ION (CLu)
1v: CHLORIDE ION (CLv)
1w: CHLORIDE ION (CLw)
1x: CHLORIDE ION (CLx)
1y: CHLORIDE ION (CLy)
1z: CHLORIDE ION (CLz)
2a: 1,3-BIS[5(DIETHYL-O-NITROBENZYLAMM... (G0Wa)
2b: 1,3-BIS[5(DIETHYL-O-NITROBENZYLAMM... (G0Wb)
2c: 1,3-BIS[5(DIETHYL-O-NITROBENZYLAMM... (G0Wc)
2d: 1,3-BIS[5(DIETHYL-O-NITROBENZYLAMM... (G0Wd)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
28
Ligand/Ion
CHLORIDE ION
2
G0W
4
Ligand/Ion
1,3-BIS[5(DIETHYL-O-NITROBENZYLAMMONIUM)PENTYL]-6-METHYLURACIL
3
NAG
6
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
4
SO4
3
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(33, 33)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:72 , ASP A:74 , TRP A:86 , GLY A:121 , TYR A:124 , GLU A:202 , SER A:203 , ASP A:283 , TRP A:286 , HIS A:287 , SER A:293 , PHE A:295 , TYR A:337 , PHE A:338 , TYR A:341 , HIS A:447 , ARG D:253 , GLY D:256 , PRO D:258 , PRO D:259 , GLY D:261 , ALA D:262
BINDING SITE FOR RESIDUE G0W A 550
02
AC2
SOFTWARE
TRP B:86 , GLY B:121 , TYR B:124 , SER B:203 , TRP B:286 , SER B:293 , PHE B:295 , TYR B:337 , PHE B:338 , TYR B:341 , TRP B:439
BINDING SITE FOR RESIDUE G0W B 550
03
AC3
SOFTWARE
ARG B:253 , PRO B:258 , PRO B:259 , GLY B:261 , ALA B:262 , TYR C:72 , ASP C:74 , TRP C:86 , GLY C:121 , TYR C:124 , GLU C:202 , SER C:203 , ASP C:283 , TRP C:286 , HIS C:287 , ILE C:294 , PHE C:295 , ARG C:296 , TYR C:337 , PHE C:338 , TYR C:341 , HOH C:2017
BINDING SITE FOR RESIDUE G0W C 550
04
AC4
SOFTWARE
ASP D:74 , TRP D:86 , GLY D:121 , TYR D:124 , GLU D:202 , SER D:203 , TRP D:286 , PHE D:295 , TYR D:337 , PHE D:338 , TYR D:341 , HOH D:2022
BINDING SITE FOR RESIDUE G0W D 550
05
AC5
SOFTWARE
ARG D:525 , ALA D:526 , GLN D:527 , THR D:528
BINDING SITE FOR RESIDUE SO4 D1540
06
AC6
SOFTWARE
ARG B:525 , ALA B:526 , GLN B:527 , THR B:528
BINDING SITE FOR RESIDUE SO4 B1542
07
AC7
SOFTWARE
ARG C:525 , ALA C:526 , GLN C:527 , THR C:528
BINDING SITE FOR RESIDUE SO4 C1541
08
AC8
SOFTWARE
GLN A:413
BINDING SITE FOR RESIDUE CL A 601
09
AC9
SOFTWARE
LEU A:515
BINDING SITE FOR RESIDUE CL A 605
10
BC1
SOFTWARE
GLN A:527
BINDING SITE FOR RESIDUE CL A 606
11
BC2
SOFTWARE
ARG A:356
BINDING SITE FOR RESIDUE CL A 607
12
BC3
SOFTWARE
ARG A:136
BINDING SITE FOR RESIDUE CL A 608
13
BC4
SOFTWARE
HOH B:2049
BINDING SITE FOR RESIDUE CL A 610
14
BC5
SOFTWARE
ARG B:356
BINDING SITE FOR RESIDUE CL B 605
15
BC6
SOFTWARE
LYS B:332
BINDING SITE FOR RESIDUE CL B 606
16
BC7
SOFTWARE
GLN B:413
BINDING SITE FOR RESIDUE CL B 607
17
BC8
SOFTWARE
SER B:240
BINDING SITE FOR RESIDUE CL B 608
18
BC9
SOFTWARE
ARG C:356
BINDING SITE FOR RESIDUE CL C 603
19
CC1
SOFTWARE
SER C:44
BINDING SITE FOR RESIDUE CL C 605
20
CC2
SOFTWARE
ASP C:333
BINDING SITE FOR RESIDUE CL C 606
21
CC3
SOFTWARE
ARG D:45
BINDING SITE FOR RESIDUE CL C 607
22
CC4
SOFTWARE
GLN C:413
BINDING SITE FOR RESIDUE CL C 608
23
CC5
SOFTWARE
SER C:240
BINDING SITE FOR RESIDUE CL C 612
24
CC6
SOFTWARE
ARG D:356
BINDING SITE FOR RESIDUE CL D 606
25
CC7
SOFTWARE
ARG D:136
BINDING SITE FOR RESIDUE CL D 607
26
CC8
SOFTWARE
ARG C:11
BINDING SITE FOR RESIDUE CL D 609
27
CC9
SOFTWARE
ARG D:525
BINDING SITE FOR RESIDUE CL D 610
28
DC1
SOFTWARE
ASN A:265 , GLU A:268
BINDING SITE FOR MONO-SACCHARIDE NAG A 560 BOUND TO ASN A 265
29
DC2
SOFTWARE
ASN B:265
BINDING SITE FOR MONO-SACCHARIDE NAG B 560 BOUND TO ASN B 265
30
DC3
SOFTWARE
ASN B:350 , LEU B:353
BINDING SITE FOR MONO-SACCHARIDE NAG B 561 BOUND TO ASN B 350
31
DC4
SOFTWARE
ASN C:265 , GLU C:268
BINDING SITE FOR MONO-SACCHARIDE NAG C 560 BOUND TO ASN C 265
32
DC5
SOFTWARE
ASN D:265 , THR D:267
BINDING SITE FOR MONO-SACCHARIDE NAG D 560 BOUND TO ASN D 265
33
DC6
SOFTWARE
SER D:347 , ASN D:350
BINDING SITE FOR MONO-SACCHARIDE NAG D 561 BOUND TO ASN D 350
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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set fontsize 20
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Asym.Unit (734 KB)
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Header - Biol.Unit 1
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