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5FEW
Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (148 KB)
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(1)
Title
:
HYDE FROM T. MARITIMA IN COMPLEX WITH S-ADENOSYL-L-CYSTEINE (FINAL PRODUCT)
Authors
:
R. Rohac, P. Amara, A. Benjdia, L. Martin, P. Ruffie, A. Favier, O. Berte J. M. Mouesca, J. C. Fontecilla-Camps, Y. Nicolet
Date
:
17 Dec 15 (Deposition) - 06 Apr 16 (Release) - 04 May 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.17
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Radical Sam Enzyme, Complex, Fefe-Hydrogenase Maturase, Thazolidine, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Rohac, P. Amara, A. Benjdia, L. Martin, P. Ruffie, A. Favier, O. Berteau, J. M. Mouesca, J. C. Fontecilla-Camps, Y. Nicolet
Carbon-Sulfur Bond-Forming Reaction Catalysed By The Radica Sam Enzyme Hyde.
Nat. Chem. V. 8 491 2016
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Hetero Components
(7, 12)
Info
All Hetero Components
1a: (2R,4R)-2-METHYL-1,3-THIAZOLIDINE-... (41Ka)
2a: S-ADENOSYL-L-CYSTEINE (5X8a)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSa)
4b: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSb)
4c: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSc)
4d: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSd)
4e: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSe)
5a: METHIONINE (METa)
6a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
7a: IRON/SULFUR CLUSTER (SF4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
41K
1
Ligand/Ion
(2R,4R)-2-METHYL-1,3-THIAZOLIDINE-2,4-DICARBOXYLIC ACID
2
5X8
1
Ligand/Ion
S-ADENOSYL-L-CYSTEINE
3
CL
2
Ligand/Ion
CHLORIDE ION
4
CPS
5
Ligand/Ion
3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE
5
MET
1
Mod. Amino Acid
METHIONINE
6
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
7
SF4
1
Ligand/Ion
IRON/SULFUR CLUSTER
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:63 , CYS A:67 , CYS A:70 , MET A:409 , SAH A:411
binding site for residue SF4 A 401
02
AC2
SOFTWARE
GLN A:98 , PHE A:99 , GLY A:100 , PRO A:276 , GLY A:277 , GLU A:280 , ARG A:284 , MET A:324 , LEU A:330 , CPS A:405 , CPS A:406 , HOH A:559 , HOH A:610 , HOH A:614 , HOH A:680 , HOH A:719 , HOH A:771 , HOH A:896
binding site for residue CPS A 402
03
AC3
SOFTWARE
LYS A:37 , ASP A:40 , LYS A:170 , ARG A:284 , SER A:297 , LYS A:315 , ASP A:316 , THR A:317 , HOH A:586 , HOH A:594 , HOH A:615 , HOH A:649 , HOH A:718 , HOH A:844
binding site for residue CPS A 403
04
AC4
SOFTWARE
ARG A:29 , GLU A:33 , THR A:247 , LEU A:250 , CPS A:405 , HOH A:511 , HOH A:644 , HOH A:697 , HOH A:918
binding site for residue CPS A 404
05
AC5
SOFTWARE
ARG A:29 , LYS A:315 , THR A:317 , ALA A:318 , CPS A:402 , CPS A:404 , CPS A:406 , HOH A:518 , HOH A:602 , HOH A:636 , HOH A:650 , HOH A:734
binding site for residue CPS A 405
06
AC6
SOFTWARE
LYS A:128 , PRO A:321 , MET A:324 , LYS A:325 , GLU A:328 , TRP A:338 , CPS A:402 , CPS A:405 , HOH A:574 , HOH A:646 , HOH A:703 , HOH A:717 , HOH A:803 , HOH A:870 , HOH A:902 , HOH A:914 , HOH A:921
binding site for residue CPS A 406
07
AC7
SOFTWARE
ARG A:54 , THR A:134 , ARG A:155
binding site for residue CL A 407
08
AC8
SOFTWARE
SER A:108 , SER A:136 , ARG A:180 , TYR A:303 , LEU A:305 , SF4 A:401 , 5X8 A:410 , SAH A:411 , HOH A:555 , HOH A:571 , HOH A:592 , HOH A:654
binding site for residue MET A 409
09
AC9
SOFTWARE
TYR A:69 , GLN A:107 , ARG A:159 , GLU A:161 , MET A:199 , PRO A:229 , ILE A:231 , THR A:268 , THR A:269 , ALA A:270 , LEU A:305 , TYR A:306 , CL A:408 , MET A:409 , SAH A:411 , 41K A:412 , HOH A:521 , HOH A:622 , HOH A:654 , HOH A:679 , HOH A:694 , HOH A:731
binding site for residue 5X8 A 410
10
AD1
SOFTWARE
TYR A:69 , SER A:108 , SER A:136 , ARG A:159 , GLU A:161 , ARG A:180 , MET A:199 , PRO A:229 , ILE A:231 , TYR A:303 , LEU A:305 , TYR A:306 , SF4 A:401 , MET A:409 , 5X8 A:410 , HOH A:555 , HOH A:571 , HOH A:592 , HOH A:654 , HOH A:694
binding site for residue SAH A 411
11
AD2
SOFTWARE
ILE A:56 , GLN A:107 , ARG A:159 , THR A:268 , THR A:269 , ALA A:270 , MET A:291 , TYR A:306 , 5X8 A:410 , HOH A:521 , HOH A:622 , HOH A:679 , HOH A:706 , HOH A:731
binding site for residues CL A 408 and 41K A 412
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Chain A
Asymmetric Unit 1
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