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5F7Q
Asym. Unit
Info
Asym.Unit (592 KB)
Biol.Unit 1 (580 KB)
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(1)
Title
:
ROK REPRESSOR LMO0178 FROM LISTERIA MONOCYTOGENES BOUND TO OPERATOR
Authors
:
S. H. Light, W. F. Anderson, Center For Structural Genomics Of Inf Diseases (Csgid)
Date
:
08 Dec 15 (Deposition) - 07 Sep 16 (Release) - 23 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : C,E,F,J,K,L
Biol. Unit 1: C,E,F,J,K,L (1x)
Keywords
:
Repressor, Open Reading Frame, Kinase, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Transcription-Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. H. Light, L. A. Cahoon, A. S. Halavaty, N. E. Freitag, W. F. Anderson
Structure To Function Of An Alpha-Glucan Metabolic Pathway That Promotes Listeria Monocytogenes Pathogenesis.
Nat Microbiol V. 2 16202 2016
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Hetero Components
(5, 18)
Info
All Hetero Components
1a: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHO... (7PEa)
1b: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHO... (7PEb)
2a: DI(HYDROXYETHYL)ETHER (PEGa)
2b: DI(HYDROXYETHYL)ETHER (PEGb)
2c: DI(HYDROXYETHYL)ETHER (PEGc)
2d: DI(HYDROXYETHYL)ETHER (PEGd)
2e: DI(HYDROXYETHYL)ETHER (PEGe)
2f: DI(HYDROXYETHYL)ETHER (PEGf)
3a: TETRAETHYLENE GLYCOL (PG4a)
3b: TETRAETHYLENE GLYCOL (PG4b)
3c: TETRAETHYLENE GLYCOL (PG4c)
4a: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-... (PG5a)
4b: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-... (PG5b)
4c: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-... (PG5c)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
5c: ZINC ION (ZNc)
5d: ZINC ION (ZNd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
7PE
2
Ligand/Ion
2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL
2
PEG
6
Ligand/Ion
DI(HYDROXYETHYL)ETHER
3
PG4
3
Ligand/Ion
TETRAETHYLENE GLYCOL
4
PG5
3
Ligand/Ion
1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
5
ZN
4
Ligand/Ion
ZINC ION
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS C:244 , CYS C:254 , CYS C:256 , CYS C:261
binding site for residue ZN C 501
02
AC2
SOFTWARE
ARG C:156 , GLN C:389 , HOH C:619
binding site for residue PG5 C 502
03
AC3
SOFTWARE
VAL C:154 , ASN C:155 , ILE C:162 , ALA C:235 , GLN C:236 , GLY C:238 , ASN E:329 , PHE E:359 , PHE E:364
binding site for residue PG4 C 503
04
AC4
SOFTWARE
GLU C:26 , GLN C:208 , ARG C:229
binding site for residue PG4 C 504
05
AC5
SOFTWARE
HIS E:244 , CYS E:254 , CYS E:256 , CYS E:261
binding site for residue ZN E 501
06
AC6
SOFTWARE
GLN E:389 , HOH E:617
binding site for residue PG5 E 502
07
AC7
SOFTWARE
ASN C:329 , VAL E:154 , ASN E:155 , ARG E:156 , GLN E:236 , GLY E:237 , GLY E:238
binding site for residue PEG E 503
08
AC8
SOFTWARE
PHE C:242 , THR C:245 , THR C:246 , ILE C:247 , PRO C:249 , TYR C:319 , ASN C:323 , PHE E:242 , THR E:245 , THR E:246 , ILE E:247 , TYR E:319 , ASN E:323
binding site for residue 7PE E 504
09
AC9
SOFTWARE
HIS J:244 , CYS J:254 , CYS J:256 , CYS J:261
binding site for residue ZN J 501
10
AD1
SOFTWARE
ARG J:156 , TYR J:233 , GLN J:389 , HOH J:620
binding site for residue PG5 J 502
11
AD2
SOFTWARE
VAL J:154 , ASN J:155 , ARG J:156 , ALA J:235 , GLN J:236 , GLY J:237 , GLY J:238 , ASN L:329 , GLU L:331 , PHE L:364 , GLU L:365 , THR L:366
binding site for residue PG4 J 504
12
AD3
SOFTWARE
PHE J:242 , THR J:245 , THR J:246 , ILE J:247 , ASN J:323 , PHE L:242 , THR L:245 , THR L:246 , ILE L:247 , PRO L:249 , ASN L:323
binding site for residue 7PE J 505
13
AD4
SOFTWARE
HIS L:244 , CYS L:254 , CYS L:256 , CYS L:261
binding site for residue ZN L 501
14
AD5
SOFTWARE
ARG L:156 , TYR L:188 , TYR L:233 , HIS L:388 , GLN L:389 , HOH L:622
binding site for residue PEG L 502
15
AD6
SOFTWARE
TRP L:202
binding site for residue PEG L 503
16
AD7
SOFTWARE
GLU L:26
binding site for residue PEG L 504
17
AD8
SOFTWARE
ALA L:36
binding site for residue PEG L 505
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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