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5F7A
Asym. Unit
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Asym.Unit (172 KB)
Biol.Unit 1 (166 KB)
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(1)
Title
:
NITRITE COMPLEX STRUCTURE OF COPPER NITRITE REDUCTASE FROM ALCALIGENES FAECALIS DETERMINED AT 293 K
Authors
:
Y. Fukuda, K. M. Tse, T. Nakane, T. Nakatsu, M. Suzuki, M. Sugahara, S. In T. Masuda, F. Yumoto, N. Matsugaki, E. Nango, K. Tono, Y. Joti, T. Kames C. Song, T. Hatsui, M. Yabashi, O. Nureki, M. E. P. Murphy, T. Inoue, S. I E. Mizohata
Date
:
07 Dec 15 (Deposition) - 16 Mar 16 (Release) - 22 Jun 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.54
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Copper, Oxidoreductase, Nitrite
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Reference
:
Y. Fukuda, K. M. Tse, T. Nakane, T. Nakatsu, M. Suzuki, M. Sugahara, S. Inoue, T. Masuda, F. Yumoto, N. Matsugaki, E. Nango, K. Tono, Y. Joti T. Kameshima, C. Song, T. Hatsui, M. Yabashi, O. Nureki, M. E. P. Murphy T. Inoue, S. Iwata, E. Mizohata
Redox-Coupled Proton Transfer Mechanism In Nitrite Reductas Revealed By Femtosecond Crystallography
Proc. Natl. Acad. Sci. Usa V. 113 2928 2016
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
1e: COPPER (II) ION (CUe)
1f: COPPER (II) ION (CUf)
2a: NITRITE ION (NO2a)
2b: NITRITE ION (NO2b)
2c: NITRITE ION (NO2c)
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No.
Name
Count
Type
Full Name
1
CU
6
Ligand/Ion
COPPER (II) ION
2
NO2
3
Ligand/Ion
NITRITE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:95 , CYS A:136 , HIS A:145 , MET A:150
binding site for residue CU A 501
2
AC2
SOFTWARE
HIS A:100 , HIS A:135 , NO2 A:503 , HIS C:306
binding site for residue CU A 502
3
AC3
SOFTWARE
ASP A:98 , HIS A:100 , HIS A:135 , CU A:502 , HIS C:255 , ILE C:257 , HIS C:306
binding site for residue NO2 A 503
4
AC4
SOFTWARE
HIS A:306 , NO2 A:505 , HIS B:100 , HIS B:135
binding site for residue CU A 504
5
AC5
SOFTWARE
HIS A:255 , ILE A:257 , HIS A:306 , LEU A:308 , CU A:504 , ASP B:98 , HIS B:100 , HIS B:135
binding site for residue NO2 A 505
6
AC6
SOFTWARE
HIS B:95 , CYS B:136 , HIS B:145 , MET B:150
binding site for residue CU B 501
7
AC7
SOFTWARE
HIS B:306 , NO2 B:503 , HIS C:100 , HIS C:135
binding site for residue CU B 502
8
AC8
SOFTWARE
HIS B:255 , ILE B:257 , HIS B:306 , LEU B:308 , CU B:502 , ASP C:98 , HIS C:100 , HIS C:135
binding site for residue NO2 B 503
9
AC9
SOFTWARE
HIS C:95 , CYS C:136 , HIS C:145 , MET C:150
binding site for residue CU C 501
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (172 KB)
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