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5F19
Asym. Unit
Info
Asym.Unit (406 KB)
Biol.Unit 1 (392 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF ASPIRIN ACETYLATED HUMAN CYCLOOXYGENASE-2
Authors
:
M. J. Lucido, B. J. Orlando, M. G. Malkowski
Date
:
30 Nov 15 (Deposition) - 16 Mar 16 (Release) - 16 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.04
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Membrane Protein, Cyclooxygenase, Cyxlooxygenase-2, Monotopic, Aspirin, Complex, Covalent Inhibitor, Oxidoreductase-Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Lucido, B. J. Orlando, A. J. Vecchio, M. G. Malkowski
Crystal Structure Of Aspirin-Acetylated Human Cyclooxygenase-2: Insight Into The Formation Of Products With Reversed Stereochemistry.
Biochemistry V. 55 1226 2016
[
close entry info
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Hetero Components
(7, 35)
Info
All Hetero Components
1a: ACRYLIC ACID (AKRa)
1b: ACRYLIC ACID (AKRb)
1c: ACRYLIC ACID (AKRc)
1d: ACRYLIC ACID (AKRd)
2a: B-OCTYLGLUCOSIDE (BOGa)
3a: PROTOPORPHYRIN IX CONTAINING CO (COHa)
3b: PROTOPORPHYRIN IX CONTAINING CO (COHb)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
4f: 1,2-ETHANEDIOL (EDOf)
4g: 1,2-ETHANEDIOL (EDOg)
4h: 1,2-ETHANEDIOL (EDOh)
4i: 1,2-ETHANEDIOL (EDOi)
4j: 1,2-ETHANEDIOL (EDOj)
4k: 1,2-ETHANEDIOL (EDOk)
4l: 1,2-ETHANEDIOL (EDOl)
4m: 1,2-ETHANEDIOL (EDOm)
4n: 1,2-ETHANEDIOL (EDOn)
4o: 1,2-ETHANEDIOL (EDOo)
5a: ALPHA-D-MANNOSE (MANa)
5b: ALPHA-D-MANNOSE (MANb)
6a: N-ACETYL-D-GLUCOSAMINE (NAGa)
6b: N-ACETYL-D-GLUCOSAMINE (NAGb)
6c: N-ACETYL-D-GLUCOSAMINE (NAGc)
6d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6e: N-ACETYL-D-GLUCOSAMINE (NAGe)
6f: N-ACETYL-D-GLUCOSAMINE (NAGf)
6g: N-ACETYL-D-GLUCOSAMINE (NAGg)
6h: N-ACETYL-D-GLUCOSAMINE (NAGh)
6i: N-ACETYL-D-GLUCOSAMINE (NAGi)
7a: O-ACETYLSERINE (OASa)
7b: O-ACETYLSERINE (OASb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
AKR
4
Ligand/Ion
ACRYLIC ACID
2
BOG
1
Ligand/Ion
B-OCTYLGLUCOSIDE
3
COH
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING CO
4
EDO
15
Ligand/Ion
1,2-ETHANEDIOL
5
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
6
NAG
9
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
7
OAS
2
Mod. Amino Acid
O-ACETYLSERINE
[
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Sites
(28, 28)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:148 , ALA A:199 , PHE A:200 , ALA A:202 , GLN A:203 , HIS A:207 , PHE A:210 , THR A:212 , HIS A:214 , ASN A:382 , TYR A:385 , HIS A:386 , HIS A:388 , LEU A:391 , VAL A:447 , GLN A:454 , HOH A:728
binding site for residue COH A 601
02
AC2
SOFTWARE
ARG A:240 , LYS A:243 , GLU A:272
binding site for residue AKR A 607
03
AC3
SOFTWARE
THR A:212 , HIS A:214 , VAL A:291 , HOH A:829 , HOH A:913
binding site for residue AKR A 608
04
AC4
SOFTWARE
PHE A:209 , ASN A:375 , PHE A:529 , OAS A:530 , GLY A:533 , HOH A:840
binding site for residue EDO A 609
05
AC5
SOFTWARE
HIS A:351 , SER A:579 , PHE A:580 , SER A:581 , HOH A:889
binding site for residue EDO A 610
06
AC6
SOFTWARE
GLY A:536 , VAL A:538 , HOH A:721 , HOH A:737 , HOH A:791 , HOH A:816 , TRP B:139
binding site for residue EDO A 611
07
AC7
SOFTWARE
CYS A:36 , HIS A:39 , PRO A:153 , HOH A:732 , HOH A:851
binding site for residue EDO A 612
08
AC8
SOFTWARE
TYR A:385 , OAS A:530 , HOH A:709
binding site for residue EDO A 613
09
AC9
SOFTWARE
ARG A:120 , TYR A:355 , HOH A:709
binding site for residue EDO A 614
10
AD1
SOFTWARE
LYS A:251 , TYR A:254 , MET A:261 , ASN A:310 , ASP A:314 , HOH A:747
binding site for residue EDO A 615
11
AD2
SOFTWARE
ALA B:199 , GLN B:203 , HIS B:207 , PHE B:210 , THR B:212 , ASN B:382 , TYR B:385 , HIS B:386 , HIS B:388 , LEU B:391
binding site for residue COH B 601
12
AD3
SOFTWARE
ARG B:240 , LYS B:243 , GLU B:272
binding site for residue AKR B 608
13
AD4
SOFTWARE
VAL B:266 , LYS B:267 , GLU B:281 , ARG B:284 , HOH B:831 , HOH B:876
binding site for residue AKR B 609
14
AD5
SOFTWARE
GLU B:308 , ARG B:311 , GLU B:339 , SER B:566 , LEU B:567 , ASN B:570 , HOH B:711
binding site for residue EDO B 610
15
AD6
SOFTWARE
PHE B:381 , PHE B:529 , OAS B:530 , GLY B:533
binding site for residue EDO B 611
16
AD7
SOFTWARE
TRP A:139 , PHE A:142 , ASN B:537 , VAL B:538 , HOH B:746 , HOH B:796 , HOH B:838
binding site for residue EDO B 612
17
AD8
SOFTWARE
ALA B:111 , HOH B:710
binding site for residue EDO B 613
18
AD9
SOFTWARE
ARG B:120 , HOH B:709
binding site for residue EDO B 614
19
AE1
SOFTWARE
GLY B:526 , HOH B:709
binding site for residue EDO B 615
20
AE2
SOFTWARE
ILE B:124 , ASP B:125 , SER B:126 , HOH B:892
binding site for residue EDO B 616
21
AE3
SOFTWARE
HIS B:90 , GLN B:192 , LEU B:352 , ARG B:513 , ALA B:516 , ILE B:517 , PHE B:518 , VAL B:523 , HOH B:719
binding site for residue EDO B 617
22
AE4
SOFTWARE
GLU A:179 , ARG A:185 , PRO A:442 , GLN A:445 , GLU B:179 , LYS B:180 , ARG B:185 , ARG B:438 , GLU B:490
binding site for residue BOG B 618
23
AE5
SOFTWARE
TYR A:55 , GLU A:67 , ASN A:68 , HOH A:712
binding site for Mono-Saccharide NAG A 602 bound to ASN A 68
24
AE6
SOFTWARE
GLU A:140 , ASN A:144 , TYR A:147 , ARG A:216 , HOH A:730 , HOH A:766 , HOH A:784 , HOH A:809 , HOH A:825 , HOH A:931 , LEU B:238 , ARG B:242
binding site for Poly-Saccharide residues NAG A 603 through MAN A 605 bound to ASN A 144
25
AE7
SOFTWARE
GLN A:406 , ASN A:410 , SER A:412 , ILE A:413 , GLU A:416 , HOH A:705
binding site for Mono-Saccharide NAG A 606 bound to ASN A 410
26
AE8
SOFTWARE
ASP A:173 , GLU A:176 , TYR B:55 , ASN B:68 , HOH B:703
binding site for Poly-Saccharide residues NAG B 602 through MAN B 604 bound to ASN B 68
27
AE9
SOFTWARE
LEU A:238 , ALA A:239 , ARG A:242 , GLU B:140 , ASN B:144 , TYR B:147 , ARG B:216 , HOH B:761 , HOH B:825 , HOH B:846 , HOH B:914
binding site for Poly-Saccharide residues NAG B 605 through NAG B 606 bound to ASN B 144
28
AF1
SOFTWARE
ASN B:410 , ILE B:413 , GLU B:416
binding site for Mono-Saccharide NAG B 607 bound to ASN B 410
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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