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5EB4
Biol. Unit 1
Info
Asym.Unit (183 KB)
Biol.Unit 1 (90 KB)
Biol.Unit 2 (90 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF ALMOND HNL, PAHNL5 V317A, EXPRESSED IN ASPERGILLUS NIGER
Authors
:
T. Pavkov-Keller, G. Steinkellner, K. Gruber
Date
:
17 Oct 15 (Deposition) - 20 Apr 16 (Release) - 05 Oct 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydroxynitrile Lyase, Prunus Amygdalus, Aspergillus Niger, Lyase
(Keyword Search:
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Reference
:
T. Pavkov-Keller, J. Bakhuis, G. Steinkellner, F. Jolink, E. Keijmel R. Birner-Gruenberger, K. Gruber
Structures Of Almond Hydroxynitrile Lyase Isoenzyme 5 Provide A Rationale For The Lack Of Oxidoreductase Activity In Flavin Dependent Hnls.
J. Biotechnol. V. 235 24 2016
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
2h: N-ACETYL-D-GLUCOSAMINE (NAGh)
2i: N-ACETYL-D-GLUCOSAMINE (NAGi)
2j: N-ACETYL-D-GLUCOSAMINE (NAGj)
2k: N-ACETYL-D-GLUCOSAMINE (NAGk)
2l: N-ACETYL-D-GLUCOSAMINE (NAGl)
2m: N-ACETYL-D-GLUCOSAMINE (NAGm)
2n: N-ACETYL-D-GLUCOSAMINE (NAGn)
2o: N-ACETYL-D-GLUCOSAMINE (NAGo)
2p: N-ACETYL-D-GLUCOSAMINE (NAGp)
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No.
Name
Count
Type
Full Name
1
FAD
1
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
NAG
7
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
4: AC5 (SOFTWARE)
5: AC6 (SOFTWARE)
6: AC7 (SOFTWARE)
7: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:33 , GLY A:35 , THR A:36 , SER A:37 , LEU A:54 , GLU A:55 , ARG A:56 , ALA A:100 , ARG A:101 , ILE A:102 , GLY A:105 , THR A:106 , ASN A:110 , ALA A:111 , GLY A:112 , VAL A:113 , ALA A:215 , VAL A:217 , SER A:257 , ALA A:258 , GLY A:259 , VAL A:380 , TRP A:459 , HIS A:460 , ASP A:487 , ALA A:488 , HIS A:498 , PRO A:499 , GLN A:500 , HOH A:760 , HOH A:776 , HOH A:777 , HOH A:798 , HOH A:814 , HOH A:836 , HOH A:848 , HOH A:862
binding site for residue FAD A 608
2
AC3
SOFTWARE
ASN A:118 , SER A:120 , GLN A:124 , HIS A:177 , ALA A:179 , SER A:324 , TYR A:327
binding site for Mono-Saccharide NAG A 606 bound to ASN A 118
3
AC4
SOFTWARE
ARG A:116 , ASN A:135 , ASP A:176
binding site for Mono-Saccharide NAG A 607 bound to ASN A 135
4
AC5
SOFTWARE
ASN A:151 , SER A:156
binding site for Mono-Saccharide NAG A 601 bound to ASN A 151
5
AC6
SOFTWARE
SER A:5 , ALA A:6 , ASN A:191 , HOH A:708 , HOH A:882
binding site for Poly-Saccharide residues NAG A 602 through NAG A 603 bound to ASN A 191
6
AC7
SOFTWARE
ASN A:375 , ASN A:385 , HOH A:843
binding site for Mono-Saccharide NAG A 604 bound to ASN A 375
7
AC8
SOFTWARE
LEU A:367 , ASN A:393 , SER A:394
binding site for Mono-Saccharide NAG A 605 bound to ASN A 393
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (183 KB)
Header - Asym.Unit
Biol.Unit 1 (90 KB)
Header - Biol.Unit 1
Biol.Unit 2 (90 KB)
Header - Biol.Unit 2
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