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5E84
Asym. Unit
Info
Asym.Unit (592 KB)
Biol.Unit 1 (105 KB)
Biol.Unit 2 (105 KB)
Biol.Unit 3 (105 KB)
Biol.Unit 4 (105 KB)
Biol.Unit 5 (105 KB)
Biol.Unit 6 (105 KB)
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(1)
Title
:
ATP-BOUND STATE OF BIP
Authors
:
Q. Liu, J. Yang, M. Nune, Y. Zong, L. Zhou
Date
:
13 Oct 15 (Deposition) - 27 Jan 16 (Release) - 27 Jan 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.99
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Keywords
:
Molecular Chaperones; Hsp70; Bip; Protein Folding; Endoplasmic Reticulum; Allosteric Coupling, Chaperone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Yang, M. Nune, Y. Zong, L. Zhou, Q. Liu
Close And Allosteric Opening Of The Polypeptide-Binding Sit In A Human Hsp70 Chaperone Bip.
Structure V. 23 2191 2015
[
close entry info
]
Hetero Components
(4, 42)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
1c: ADENOSINE-5'-TRIPHOSPHATE (ATPc)
1d: ADENOSINE-5'-TRIPHOSPHATE (ATPd)
1e: ADENOSINE-5'-TRIPHOSPHATE (ATPe)
1f: ADENOSINE-5'-TRIPHOSPHATE (ATPf)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
2h: MAGNESIUM ION (MGh)
2i: MAGNESIUM ION (MGi)
2j: MAGNESIUM ION (MGj)
2k: MAGNESIUM ION (MGk)
2l: MAGNESIUM ION (MGl)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
4e: ZINC ION (ZNe)
4f: ZINC ION (ZNf)
4g: ZINC ION (ZNg)
4h: ZINC ION (ZNh)
4i: ZINC ION (ZNi)
4j: ZINC ION (ZNj)
4k: ZINC ION (ZNk)
4l: ZINC ION (ZNl)
4m: ZINC ION (ZNm)
4n: ZINC ION (ZNn)
4o: ZINC ION (ZNo)
4p: ZINC ION (ZNp)
4q: ZINC ION (ZNq)
4r: ZINC ION (ZNr)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
6
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
MG
12
Ligand/Ion
MAGNESIUM ION
3
SO4
6
Ligand/Ion
SULFATE ION
4
ZN
18
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(42, 42)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:36 , THR A:37 , THR A:38 , TYR A:39 , LYS A:96 , GLU A:201 , GLY A:226 , GLY A:227 , GLY A:228 , ALA A:229 , GLY A:255 , GLU A:293 , LYS A:296 , ARG A:297 , SER A:300 , GLY A:363 , GLY A:364 , SER A:365 , ARG A:367 , ILE A:368 , ZN A:802
binding site for residue ATP A 801
02
AC2
SOFTWARE
ASP A:34 , ATP A:801
binding site for residue ZN A 802
03
AC3
SOFTWARE
ASP A:608 , ASP A:611 , ASP C:608 , ASP C:611 , MG C:803
binding site for residue MG A 803
04
AC4
SOFTWARE
GLU A:316 , GLU C:310 , ASP C:317
binding site for residue MG A 804
05
AC5
SOFTWARE
GLU A:310 , ASP A:317 , GLU C:316
binding site for residue MG A 805
06
AC6
SOFTWARE
GLU A:201 , ASP A:224 , ASP A:231
binding site for residue ZN A 806
07
AC7
SOFTWARE
ASP A:238
binding site for residue ZN A 807
08
AC8
SOFTWARE
GLU A:25 , VAL A:27 , HIS A:167 , ASN A:194
binding site for residue SO4 A 808
09
AC9
SOFTWARE
ASP B:34 , GLY B:36 , THR B:37 , THR B:38 , TYR B:39 , LYS B:96 , GLU B:201 , GLY B:226 , GLY B:227 , GLY B:228 , ALA B:229 , GLY B:255 , GLU B:293 , LYS B:296 , ARG B:297 , SER B:300 , GLY B:363 , GLY B:364 , SER B:365 , ARG B:367 , ILE B:368 , ZN B:802 , ZN B:803 , HOH B:903
binding site for residue ATP B 801
10
AD1
SOFTWARE
ASP B:34 , ATP B:801 , HOH B:903
binding site for residue ZN B 802
11
AD2
SOFTWARE
GLU B:201 , ASP B:224 , ALA B:229 , ASP B:231 , ATP B:801
binding site for residue ZN B 803
12
AD3
SOFTWARE
ASP B:608 , ASP B:611 , ASP D:606
binding site for residue MG B 804
13
AD4
SOFTWARE
GLU B:310 , ASP B:317 , GLU F:314
binding site for residue MG B 805
14
AD5
SOFTWARE
GLU B:316 , GLU F:316
binding site for residue MG B 806
15
AD6
SOFTWARE
ASP B:238
binding site for residue ZN B 807
16
AD7
SOFTWARE
GLU B:25 , HIS B:167 , ASN B:194
binding site for residue SO4 B 808
17
AD8
SOFTWARE
GLY C:36 , THR C:37 , THR C:38 , TYR C:39 , LYS C:96 , GLU C:201 , GLY C:226 , GLY C:227 , GLY C:228 , ALA C:229 , GLY C:255 , GLU C:293 , LYS C:296 , ARG C:297 , SER C:300 , GLY C:363 , GLY C:364 , SER C:365 , ARG C:367 , ILE C:368 , ASP C:391 , ZN C:802 , HOH C:901
binding site for residue ATP C 801
18
AD9
SOFTWARE
ASP C:34 , ATP C:801 , HOH C:901
binding site for residue ZN C 802
19
AE1
SOFTWARE
ASP A:608 , ASP A:611 , MG A:803 , ASP C:608 , ASP C:611
binding site for residue MG C 803
20
AE2
SOFTWARE
GLU C:201 , ASP C:224 , ASP C:231
binding site for residue ZN C 804
21
AE3
SOFTWARE
ASP C:238
binding site for residue ZN C 805
22
AE4
SOFTWARE
GLU C:25 , VAL C:27 , HIS C:167 , ASN C:194
binding site for residue SO4 C 806
23
AE5
SOFTWARE
GLY D:36 , THR D:37 , THR D:38 , TYR D:39 , LYS D:96 , GLU D:201 , GLY D:226 , GLY D:227 , GLY D:228 , ALA D:229 , GLY D:255 , GLU D:293 , LYS D:296 , ARG D:297 , SER D:300 , GLY D:363 , GLY D:364 , SER D:365 , ARG D:367 , ILE D:368 , ZN D:802 , HOH D:901
binding site for residue ATP D 801
24
AE6
SOFTWARE
ASP D:34 , ATP D:801 , HOH D:901
binding site for residue ZN D 802
25
AE7
SOFTWARE
LYS B:550 , ASP D:608 , ASP D:611
binding site for residue MG D 803
26
AE8
SOFTWARE
GLU D:316 , GLU E:310 , ASP E:317
binding site for residue MG D 804
27
AE9
SOFTWARE
GLU D:310 , ASP D:317 , GLU E:316
binding site for residue MG D 805
28
AF1
SOFTWARE
GLU D:201 , ASP D:224 , ASP D:231
binding site for residue ZN D 806
29
AF2
SOFTWARE
ASP D:238
binding site for residue ZN D 807
30
AF3
SOFTWARE
GLU D:25 , VAL D:27 , HIS D:167 , ASN D:194
binding site for residue SO4 D 808
31
AF4
SOFTWARE
GLY E:36 , THR E:37 , THR E:38 , TYR E:39 , LYS E:96 , GLU E:201 , GLY E:226 , GLY E:227 , GLY E:228 , ALA E:229 , GLY E:255 , GLU E:293 , LYS E:296 , ARG E:297 , SER E:300 , GLY E:363 , GLY E:364 , SER E:365 , ARG E:367 , ILE E:368 , ASP E:391 , ZN E:803 , ZN E:804 , HOH E:903
binding site for residue ATP E 801
32
AF5
SOFTWARE
ASP E:608 , ASP E:611 , LYS F:550
binding site for residue MG E 802
33
AF6
SOFTWARE
GLU E:201 , ASP E:224 , ASP E:231 , ATP E:801
binding site for residue ZN E 803
34
AF7
SOFTWARE
ASP E:34 , ATP E:801 , HOH E:903
binding site for residue ZN E 804
35
AF8
SOFTWARE
ASP E:238
binding site for residue ZN E 805
36
AF9
SOFTWARE
GLU E:25 , HIS E:167 , ASN E:194
binding site for residue SO4 E 806
37
AG1
SOFTWARE
ASP F:34 , GLY F:36 , THR F:37 , THR F:38 , TYR F:39 , LYS F:96 , GLU F:201 , GLY F:226 , GLY F:227 , GLY F:228 , ALA F:229 , GLY F:255 , GLU F:293 , LYS F:296 , ARG F:297 , SER F:300 , GLY F:363 , GLY F:364 , SER F:365 , ARG F:367 , ILE F:368 , ZN F:802 , HOH F:901
binding site for residue ATP F 801
38
AG2
SOFTWARE
ASP F:34 , ATP F:801 , HOH F:901
binding site for residue ZN F 802
39
AG3
SOFTWARE
ASP E:606 , ASP F:608 , ASP F:611
binding site for residue MG F 803
40
AG4
SOFTWARE
GLU F:201 , ASP F:224 , ASP F:231
binding site for residue ZN F 804
41
AG5
SOFTWARE
ASP F:238
binding site for residue ZN F 805
42
AG6
SOFTWARE
GLU F:25 , VAL F:27 , HIS F:167 , ASN F:194
binding site for residue SO4 F 806
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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Pfam Domains
(0, 0)
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