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5E83
Asym. Unit
Info
Asym.Unit (211 KB)
Biol.Unit 1 (203 KB)
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Title
:
CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN S (LIGANDED SICKLE CELL HEMOGLOBIN) COMPLEXED WITH GBT440, CO-CRYSTALLIZATION EXPERIMENT
Authors
:
L. Patskovska, Y. Patskovsky, J. B. Bonanno, S. C. Almo
Date
:
13 Oct 15 (Deposition) - 20 Jul 16 (Release) - 05 Oct 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Mutant Human Hemoglobin S[Betae6V], R2 Quaternary State, Oxygen Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Oksenberg, K. Dufu, M. P. Patel, C. Chuang, Z. Li, Q. Xu, A. Silva-Garcia, C. Zhou, A. Hutchaleelaha, L. Patskovska, Y. Patskovsky, S. C. Almo, U. Sinha, B. W. Metcalf, D. R. Archer
Gbt440 Increases Haemoglobin Oxygen Affinity, Reduces Sickling And Prolongs Rbc Half-Life In A Murine Model Of Sickle Cell Disease.
Br. J. Haematol. V. 175 141 2016
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Hetero Components
(5, 13)
Info
All Hetero Components
1a: 2-METHYL-3-({2-[1-(PROPAN-2-YL)-1H... (5L7a)
2a: CARBON MONOXIDE (CMOa)
2b: CARBON MONOXIDE (CMOb)
2c: CARBON MONOXIDE (CMOc)
2d: CARBON MONOXIDE (CMOd)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
4d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
5a: UNKNOWN LIGAND (UNLa)
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No.
Name
Count
Type
Full Name
1
5L7
1
Ligand/Ion
2-METHYL-3-({2-[1-(PROPAN-2-YL)-1H-PYRAZOL-5-YL]PYRIDIN-3-YL}METHOXY)PHENOL
2
CMO
4
Ligand/Ion
CARBON MONOXIDE
3
GOL
3
Ligand/Ion
GLYCEROL
4
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
UNL
1
Ligand/Ion
UNKNOWN LIGAND
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
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Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:42 , PHE A:43 , HIS A:45 , PHE A:46 , HIS A:58 , LYS A:61 , LEU A:83 , LEU A:86 , HIS A:87 , LEU A:91 , ASN A:97 , PHE A:98 , LEU A:101 , LEU A:136 , CMO A:202 , HOH A:302 , HOH A:311
binding site for residue HEM A 201
02
AC2
SOFTWARE
LEU A:29 , HIS A:58 , VAL A:62 , HEM A:201
binding site for residue CMO A 202
03
AC3
SOFTWARE
LYS A:139 , PRO D:36 , GLN D:39 , LEU D:48 , THR D:50 , PRO D:51 , HOH D:321
binding site for residue GOL A 204
04
AC4
SOFTWARE
PHE B:41 , PHE B:42 , HIS B:63 , LEU B:88 , LEU B:91 , HIS B:92 , LEU B:96 , ASN B:102 , PHE B:103 , LEU B:106 , CMO B:202 , HOH B:304
binding site for residue HEM B 201
05
AC5
SOFTWARE
HIS B:63 , VAL B:67 , HEM B:201
binding site for residue CMO B 202
06
AC6
SOFTWARE
TYR C:42 , PHE C:43 , HIS C:45 , PHE C:46 , HIS C:58 , LYS C:61 , ALA C:65 , LEU C:83 , LEU C:86 , HIS C:87 , LEU C:91 , ASN C:97 , PHE C:98 , LEU C:101 , CMO C:202 , HOH C:340
binding site for residue HEM C 201
07
AC7
SOFTWARE
PHE C:43 , HIS C:58 , VAL C:62 , HEM C:201
binding site for residue CMO C 202
08
AC8
SOFTWARE
PHE D:41 , PHE D:42 , PHE D:45 , HIS D:63 , LEU D:88 , LEU D:91 , HIS D:92 , LEU D:96 , ASN D:102 , PHE D:103 , LEU D:106 , LEU D:141 , CMO D:202 , HOH D:340
binding site for residue HEM D 201
09
AC9
SOFTWARE
HIS D:63 , VAL D:67 , HEM D:201
binding site for residue CMO D 202
10
AD1
SOFTWARE
PRO D:100 , ARG D:104 , ALA D:138 , ASN D:139 , HOH D:301 , HOH D:304
binding site for residue GOL D 203
11
AD2
SOFTWARE
HIS D:2 , LEU D:3 , LEU D:78 , LEU D:81 , GLY D:136 , HOH D:323 , HOH D:331 , HOH D:337
binding site for residue GOL D 204
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (211 KB)
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