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5E7O
Biol. Unit 2
Info
Asym.Unit (1.2 MB)
Biol.Unit 1 (228 KB)
Biol.Unit 2 (227 KB)
Biol.Unit 3 (227 KB)
Biol.Unit 4 (226 KB)
Biol.Unit 5 (224 KB)
Biol.Unit 6 (225 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE PERCHLORATE REDUCTASE PCRAB MUTANT W461E OF PCRA FROM AZOSPIRA SUILLUM PS
Authors
:
C. -L. Tsai, J. A. Tainer
Date
:
12 Oct 15 (Deposition) - 09 Mar 16 (Release) - 11 May 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K,L (1x)
Keywords
:
Oxidoreductase Mo-Bismgd Fe-S Cluster Perchlorate Dissmilation, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. D. Youngblut, C. L. Tsai, I. C. Clark, H. K. Carlson, A. P. Maglaqui, P. S. Gau-Pan, S. A. Redford, A. Wong, J. A. Tainer, J. D. Coates
Perchlorate Reductase Is Distinguished By Active Site Aromatic Gate Residues.
J. Biol. Chem. V. 291 9190 2016
[
close entry info
]
Hetero Components
(5, 11)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1aa: 1,2-ETHANEDIOL (EDOaa)
1ab: 1,2-ETHANEDIOL (EDOab)
1ac: 1,2-ETHANEDIOL (EDOac)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
1u: 1,2-ETHANEDIOL (EDOu)
1v: 1,2-ETHANEDIOL (EDOv)
1w: 1,2-ETHANEDIOL (EDOw)
1x: 1,2-ETHANEDIOL (EDOx)
1y: 1,2-ETHANEDIOL (EDOy)
1z: 1,2-ETHANEDIOL (EDOz)
2a: FE3-S4 CLUSTER (F3Sa)
2b: FE3-S4 CLUSTER (F3Sb)
2c: FE3-S4 CLUSTER (F3Sc)
2d: FE3-S4 CLUSTER (F3Sd)
2e: FE3-S4 CLUSTER (F3Se)
2f: FE3-S4 CLUSTER (F3Sf)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
4a: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1a)
4b: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1b)
4c: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1c)
4d: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1d)
4e: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1e)
4f: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1f)
5a: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDa)
5b: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDb)
5c: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDc)
5d: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDd)
5e: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDe)
5f: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDf)
6a: MOLYBDENUM ATOM (MOa)
6b: MOLYBDENUM ATOM (MOb)
6c: MOLYBDENUM ATOM (MOc)
6d: MOLYBDENUM ATOM (MOd)
6e: MOLYBDENUM ATOM (MOe)
6f: MOLYBDENUM ATOM (MOf)
7a: IRON/SULFUR CLUSTER (SF4a)
7b: IRON/SULFUR CLUSTER (SF4b)
7c: IRON/SULFUR CLUSTER (SF4c)
7d: IRON/SULFUR CLUSTER (SF4d)
7e: IRON/SULFUR CLUSTER (SF4e)
7f: IRON/SULFUR CLUSTER (SF4f)
7g: IRON/SULFUR CLUSTER (SF4g)
7h: IRON/SULFUR CLUSTER (SF4h)
7i: IRON/SULFUR CLUSTER (SF4i)
7j: IRON/SULFUR CLUSTER (SF4j)
7k: IRON/SULFUR CLUSTER (SF4k)
7l: IRON/SULFUR CLUSTER (SF4l)
7m: IRON/SULFUR CLUSTER (SF4m)
7n: IRON/SULFUR CLUSTER (SF4n)
7o: IRON/SULFUR CLUSTER (SF4o)
7p: IRON/SULFUR CLUSTER (SF4p)
7q: IRON/SULFUR CLUSTER (SF4q)
7r: IRON/SULFUR CLUSTER (SF4r)
7s: IRON/SULFUR CLUSTER (SF4s)
7t: IRON/SULFUR CLUSTER (SF4t)
7u: IRON/SULFUR CLUSTER (SF4u)
7v: IRON/SULFUR CLUSTER (SF4v)
7w: IRON/SULFUR CLUSTER (SF4w)
7x: IRON/SULFUR CLUSTER (SF4x)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
F3S
1
Ligand/Ion
FE3-S4 CLUSTER
3
GOL
-1
Ligand/Ion
GLYCEROL
4
MD1
1
Ligand/Ion
PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YLESTER GUANYLATE ESTER
5
MGD
1
Ligand/Ion
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINEDINUCLEOTIDE
6
MO
-1
Ligand/Ion
MOLYBDENUM ATOM
7
SF4
4
Ligand/Ion
IRON/SULFUR CLUSTER
[
close Hetero Component info
]
Sites
(14, 14)
Info
All Sites
01: AC8 (SOFTWARE)
02: AD2 (SOFTWARE)
03: AD8 (SOFTWARE)
04: AD9 (SOFTWARE)
05: AE1 (SOFTWARE)
06: AE2 (SOFTWARE)
07: AE3 (SOFTWARE)
08: AE4 (SOFTWARE)
09: AE5 (SOFTWARE)
10: AE6 (SOFTWARE)
11: AE7 (SOFTWARE)
12: AE8 (SOFTWARE)
13: AE9 (SOFTWARE)
14: AF1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC8
SOFTWARE
LYS A:802 , ARG A:890 , THR A:895 , ILE A:897 , HOH A:1144 , HOH A:1153 , HOH A:1392 , TYR C:491 , VAL C:496 , GLU C:508
binding site for residue GOL A 1008
02
AD2
SOFTWARE
TRP A:806 , ARG B:103 , ARG B:105 , HOH B:556 , HOH B:629 , HOH B:637 , GLU C:495 , ASN C:553
binding site for residue EDO B 401
03
AD8
SOFTWARE
HIS C:32 , VAL C:34 , CYS C:36 , GLY C:38 , CYS C:40 , GLY C:73 , CYS C:74 , GLY C:77
binding site for residue SF4 C 1001
04
AD9
SOFTWARE
ASP C:170 , MGD C:1003 , MD1 C:1004
binding site for residue MO C 1002
05
AE1
SOFTWARE
ASN C:35 , LYS C:76 , ASP C:170 , GLY C:201 , ASN C:203 , GLN C:206 , THR C:207 , ARG C:208 , ILE C:228 , SER C:229 , PRO C:230 , ASP C:231 , ASN C:233 , GLY C:248 , ASP C:250 , GLY C:421 , GLY C:422 , GLY C:423 , TRP C:427 , ILE C:458 , GLY C:459 , ASN C:761 , PRO C:763 , HIS C:764 , SER C:765 , ARG C:766 , SER C:768 , HIS C:770 , ARG C:830 , HIS C:835 , ARG C:882 , MO C:1002 , MD1 C:1004 , HOH C:1268 , HOH C:1351 , HOH C:1386
binding site for residue MGD C 1003
06
AE2
SOFTWARE
LEU C:33 , ASN C:35 , PRO C:138 , TYR C:168 , ASP C:170 , ARG C:537 , GLY C:538 , ASN C:539 , GLN C:543 , LYS C:545 , ILE C:564 , ASN C:565 , ILE C:566 , ARG C:567 , ASP C:569 , SER C:581 , TRP C:584 , LYS C:587 , ASP C:615 , SER C:762 , HIS C:764 , VAL C:769 , HIS C:770 , SER C:771 , THR C:772 , HIS C:835 , CYS C:836 , GLN C:849 , GLN C:881 , ARG C:882 , MO C:1002 , MGD C:1003 , HOH C:1202 , HOH C:1224 , HOH C:1270 , HOH C:1289 , HOH C:1333 , HOH C:1343
binding site for residue MD1 C 1004
07
AE3
SOFTWARE
TRP C:242 , HIS C:244 , GLY C:397 , VAL C:398 , THR C:399 , HOH C:1253 , GLU D:268 , GLY D:272 , HOH D:518
binding site for residue EDO C 1005
08
AE4
SOFTWARE
TYR C:510 , SER C:514 , THR C:736 , LEU C:861 , VAL C:862
binding site for residue EDO C 1006
09
AE5
SOFTWARE
ASP C:803 , ASN C:804 , ASP C:805 , PRO C:896 , SER C:898 , HOH C:1139 , PRO D:110
binding site for residue EDO C 1007
10
AE6
SOFTWARE
CYS D:149 , CYS D:170 , LYS D:171 , ALA D:173 , GLN D:174 , ALA D:175 , CYS D:176 , ALA D:194
binding site for residue F3S D 401
11
AE7
SOFTWARE
CYS D:137 , ASN D:138 , CYS D:140 , CYS D:145 , CYS D:180 , TYR D:182
binding site for residue SF4 D 402
12
AE8
SOFTWARE
CYS D:21 , ILE D:22 , CYS D:24 , GLN D:25 , CYS D:27 , ARG D:47 , VAL D:49 , CYS D:216 , VAL D:217 , GLY D:218
binding site for residue SF4 D 403
13
AE9
SOFTWARE
CYS D:31 , ARG D:47 , MET D:136 , CYS D:197 , GLY D:199 , CYS D:200 , CYS D:212
binding site for residue SF4 D 404
14
AF1
SOFTWARE
PHE C:9 , HOH C:1116 , TYR D:155 , ARG D:157 , GLN D:159 , HOH D:502
binding site for residue EDO D 405
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SAPs(SNPs)/Variants
(0, 0)
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Asym.Unit (1.2 MB)
Header - Asym.Unit
Biol.Unit 1 (228 KB)
Header - Biol.Unit 1
Biol.Unit 2 (227 KB)
Header - Biol.Unit 2
Biol.Unit 3 (227 KB)
Header - Biol.Unit 3
Biol.Unit 4 (226 KB)
Header - Biol.Unit 4
Biol.Unit 5 (224 KB)
Header - Biol.Unit 5
Biol.Unit 6 (225 KB)
Header - Biol.Unit 6
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