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5E0I
Biol. Unit 2
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Asym.Unit (309 KB)
Biol.Unit 1 (300 KB)
Biol.Unit 2 (301 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HBV CAPSID Y132A MUTANT (VCID 8772) IN COMPLEX WITH NVR10-001E2 AT 1.95A RESOLUTION
Authors
:
C. M. Lukacs, J. Abendroth, K. Klumpp
Date
:
28 Sep 15 (Deposition) - 09 Dec 15 (Release) - 16 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: A,B,C,D,E,F (1x)
Keywords
:
Nvr10-001E2, Viral Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
K. Klumpp, A. M. Lam, C. Lukacs, R. Vogel, S. Ren, C. Espiritu, R. Baydo, K. Atkins, J. Abendroth, G. Liao, A. Efimov, G. Hartman, O. A. Flores
High-Resolution Crystal Structure Of A Hepatitis B Virus Replication Inhibitor Bound To The Viral Core Protein.
Proc. Natl. Acad. Sci. Usa V. 112 15196 2015
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: METHYL 4-(2-BROMO-4-FLUOROPHENYL)-... (5J6a)
1b: METHYL 4-(2-BROMO-4-FLUOROPHENYL)-... (5J6b)
1c: METHYL 4-(2-BROMO-4-FLUOROPHENYL)-... (5J6c)
1d: METHYL 4-(2-BROMO-4-FLUOROPHENYL)-... (5J6d)
1e: METHYL 4-(2-BROMO-4-FLUOROPHENYL)-... (5J6e)
1f: METHYL 4-(2-BROMO-4-FLUOROPHENYL)-... (5J6f)
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No.
Name
Count
Type
Full Name
1
5J6
2
Ligand/Ion
METHYL 4-(2-BROMO-4-FLUOROPHENYL)-6-(MORPHOLIN-4-YLMETHYL)-2-(1,3-THIAZOL-2-YL)PYRIMIDINE-5-CARBOXYLATE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE A:23 , PRO A:25 , ASP A:29 , LEU A:30 , THR A:33 , LEU A:37 , TRP A:102 , SER A:106 , THR A:109 , PHE A:110 , TYR A:118 , LEU A:140 , HOH A:622 , HOH A:655 , VAL D:124 , ARG D:127 , THR D:128 , ALA D:132 , PRO D:134
binding site for residue 5J6 A 500
2
AC2
SOFTWARE
PHE B:23 , PRO B:25 , ASP B:29 , LEU B:30 , THR B:33 , LEU B:37 , TRP B:102 , SER B:106 , THR B:109 , PHE B:110 , TYR B:118 , LEU B:140 , HOH B:641 , VAL C:124 , ARG C:127 , THR C:128 , ALA C:132 , PRO C:134
binding site for residue 5J6 B 500
3
AC3
SOFTWARE
PHE C:23 , PRO C:25 , ASP C:29 , LEU C:30 , THR C:33 , LEU C:37 , TRP C:102 , ILE C:105 , SER C:106 , THR C:109 , PHE C:110 , TYR C:118 , LEU C:140 , HOH C:625 , HOH C:649 , VAL F:124 , ARG F:127 , THR F:128 , ALA F:132 , PRO F:134
binding site for residue 5J6 C 500
4
AC4
SOFTWARE
PHE D:23 , PRO D:25 , ASP D:29 , THR D:33 , LEU D:37 , TRP D:102 , ILE D:105 , SER D:106 , THR D:109 , PHE D:110 , TYR D:118 , LEU D:140 , HOH D:628 , HOH D:646 , VAL E:124 , TRP E:125 , ARG E:127 , THR E:128 , ALA E:132 , PRO E:134
binding site for residue 5J6 D 500
5
AC5
SOFTWARE
VAL B:124 , ARG B:127 , THR B:128 , ALA B:132 , PRO B:134 , PHE E:23 , PRO E:25 , ASP E:29 , LEU E:30 , THR E:33 , LEU E:37 , TRP E:102 , SER E:106 , THR E:109 , PHE E:110 , TYR E:118 , LEU E:140 , HOH E:614 , HOH E:637
binding site for residue 5J6 E 500
6
AC6
SOFTWARE
VAL A:124 , ARG A:127 , THR A:128 , ALA A:132 , PRO A:134 , PHE F:23 , PRO F:25 , ASP F:29 , LEU F:30 , THR F:33 , LEU F:37 , TRP F:102 , ILE F:105 , SER F:106 , THR F:109 , PHE F:110 , TYR F:118 , LEU F:140 , HOH F:611
binding site for residue 5J6 F 500
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Asym.Unit (309 KB)
Header - Asym.Unit
Biol.Unit 1 (300 KB)
Header - Biol.Unit 1
Biol.Unit 2 (301 KB)
Header - Biol.Unit 2
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