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5DVA
Biol. Unit 2
Info
Asym.Unit (506 KB)
Biol.Unit 1 (251 KB)
Biol.Unit 2 (251 KB)
Biol.Unit 3 (251 KB)
Biol.Unit 4 (251 KB)
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(1)
Title
:
FRAGMENTS BOUND TO THE OXA-48 BETA-LACTAMASE: COMPOUND 1
Authors
:
B. A. Lund, T. Christopeit, H. -K. S. Leiros
Date
:
21 Sep 15 (Deposition) - 01 Jun 16 (Release) - 22 Jun 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Biol. Unit 3: B,D (1x)
Biol. Unit 4: A,C (1x)
Keywords
:
Hydrolase, Inhibitor, Complex, Fragment, Lactamase
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Reference
:
B. A. Lund, T. Christopeit, Y. Guttormsen, A. Bayer, H. K. Leiros
Screening And Design Of Inhibitor Scaffolds For The Antibiotic Resistance Oxacillinase-48 (Oxa-48) Through Surface Plasmon Resonance Screening.
J. Med. Chem. V. 59 5542 2016
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: 3-(PYRIDIN-4-YL)BENZOIC ACID (5FLa)
1b: 3-(PYRIDIN-4-YL)BENZOIC ACID (5FLb)
1c: 3-(PYRIDIN-4-YL)BENZOIC ACID (5FLc)
1d: 3-(PYRIDIN-4-YL)BENZOIC ACID (5FLd)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
3b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
3c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
3d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
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No.
Name
Count
Type
Full Name
1
5FL
1
Ligand/Ion
3-(PYRIDIN-4-YL)BENZOIC ACID
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
KCX
1
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
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Sites
(3, 3)
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1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
SER B:70 , SER B:118 , THR B:209 , GLY B:210 , TYR B:211 , ARG B:250
binding site for residue 5FL B 301
2
AC3
SOFTWARE
ARG B:206 , HOH B:515 , HOH B:516
binding site for residue CL B 302
3
AC6
SOFTWARE
SER D:70 , ILE D:102 , TRP D:105 , SER D:118 , THR D:209 , TYR D:211 , THR D:213 , SER D:244 , ARG D:250 , HOH D:406 , HOH D:535
binding site for residue 5FL D 301
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Asym.Unit (506 KB)
Header - Asym.Unit
Biol.Unit 1 (251 KB)
Header - Biol.Unit 1
Biol.Unit 2 (251 KB)
Header - Biol.Unit 2
Biol.Unit 3 (251 KB)
Header - Biol.Unit 3
Biol.Unit 4 (251 KB)
Header - Biol.Unit 4
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