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5DNC
Asym. Unit
Info
Asym.Unit (243 KB)
Biol.Unit 1 (232 KB)
Biol.Unit 2 (461 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ASN-BOUND GUINEA PIG L-ASPARAGINASE 1 CATALYTIC DOMAIN ACTIVE SITE MUTANT T19A
Authors
:
A. M. Schalk, A. Lavie
Date
:
09 Sep 15 (Deposition) - 13 Jan 16 (Release) - 23 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.01
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: A,B,C,D (2x)
Keywords
:
Asparaginase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. M. Schalk, A. Antansijevic, M. Caffrey, A. Lavie
Experimental Data In Support Of A Direct Displacement Mechanism For Type I/Ii L-Asparaginases.
J. Biol. Chem. V. 291 5088 2016
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Hetero Components
(2, 21)
Info
All Hetero Components
1a: ASPARAGINE (ASNa)
1b: ASPARAGINE (ASNb)
1c: ASPARAGINE (ASNc)
1d: ASPARAGINE (ASNd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ASN
4
Mod. Amino Acid
ASPARAGINE
2
EDO
17
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:18 , ALA A:19 , ASP A:84 , SER A:85 , GLY A:115 , THR A:116 , ASP A:117 , ALA A:142 , GLN A:143 , HOH A:765 , TYR D:308
binding site for residue ASN A 601
02
AC2
SOFTWARE
GLU A:131 , TYR A:334 , ARG A:355
binding site for residue EDO A 602
03
AC3
SOFTWARE
PRO A:204 , THR A:207 , THR A:213 , ALA A:215
binding site for residue EDO A 603
04
AC4
SOFTWARE
ASN A:201 , SER A:297 , CYS A:299 , LEU A:300 , GLY A:302 , MET A:323 , HOH A:702
binding site for residue EDO A 604
05
AC5
SOFTWARE
ASN A:233 , MET A:234 , GLU A:235 , HOH A:778 , HOH A:781 , ASP B:278
binding site for residue EDO A 605
06
AC6
SOFTWARE
SER A:178 , VAL A:208 , GLY A:209 , LYS B:193 , PHE B:194 , GLU B:195
binding site for residue EDO A 606
07
AC7
SOFTWARE
GLY B:18 , ALA B:19 , MET B:22 , ASP B:84 , SER B:85 , GLY B:115 , THR B:116 , ASP B:117 , ALA B:142 , HOH B:789 , TYR C:308
binding site for residue ASN B 601
08
AC8
SOFTWARE
GLY B:21 , GLN B:23 , GLY B:32 , PRO B:33 , GLY B:34 , ARG B:147 , HOH B:757
binding site for residue EDO B 602
09
AC9
SOFTWARE
GLU B:131 , TYR B:334 , LEU B:354 , ARG B:355
binding site for residue EDO B 603
10
AD1
SOFTWARE
PRO B:204 , THR B:207 , THR B:213
binding site for residue EDO B 604
11
AD2
SOFTWARE
ASN B:201 , SER B:297 , CYS B:299 , LEU B:300 , GLY B:302 , MET B:323 , HOH B:704
binding site for residue EDO B 605
12
AD3
SOFTWARE
TYR B:308 , HOH B:718 , GLY C:18 , ALA C:19 , MET C:22 , ASP C:84 , SER C:85 , GLY C:115 , THR C:116 , ASP C:117 , ALA C:142 , GLN C:143 , HOH C:771
binding site for residue ASN C 601
13
AD4
SOFTWARE
ASN C:201 , SER C:297 , CYS C:299 , LEU C:300 , GLY C:302 , HOH C:706 , HOH C:717
binding site for residue EDO C 602
14
AD5
SOFTWARE
PRO C:204 , THR C:207 , ALA C:215
binding site for residue EDO C 603
15
AD6
SOFTWARE
GLU C:131 , TYR C:334 , ARG C:355
binding site for residue EDO C 604
16
AD7
SOFTWARE
ARG C:220 , LYS C:221
binding site for residue EDO C 605
17
AD8
SOFTWARE
ASN A:272 , TYR A:308 , GLY D:18 , ALA D:19 , MET D:22 , ASP D:84 , SER D:85 , GLY D:115 , THR D:116 , ASP D:117 , ALA D:142 , GLN D:143 , HOH D:784
binding site for residue ASN D 601
18
AD9
SOFTWARE
GLY D:21 , GLY D:32 , PRO D:33 , GLY D:34 , ARG D:147 , HOH D:742
binding site for residue EDO D 602
19
AE1
SOFTWARE
SER C:178 , VAL C:208 , GLY C:209 , LYS D:193 , PHE D:194 , GLU D:195
binding site for residue EDO D 603
20
AE2
SOFTWARE
GLU D:131 , TYR D:334 , ARG D:355
binding site for residue EDO D 604
21
AE3
SOFTWARE
ASN D:201 , SER D:297 , CYS D:299 , LEU D:300 , GLY D:302 , MET D:323 , HOH D:712 , HOH D:744
binding site for residue EDO D 605
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SAPs(SNPs)/Variants
(0, 0)
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