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5DLP
Asym. Unit
Info
Asym.Unit (186 KB)
Biol.Unit 1 (180 KB)
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(1)
Title
:
ACETYCHOLINESTERASE METHYLENE BLUE NO PEG
Authors
:
O. Dym
Date
:
07 Sep 15 (Deposition) - 30 Mar 16 (Release) - 01 Jun 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Inhibitor, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
O. Dym, W. Song, C. Felder, E. Roth, V. Shnyrov, Y. Ashani, Y. Xu, R. P. Joosten, L. Weiner, J. L. Sussman, I. Silman
The Impact Of Crystallization Conditions On Structure-Based Drug Design: A Case Study On The Methylene Blue/Acetylcholinesterase Complex.
Protein Sci. V. 25 1096 2016
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Hetero Components
(6, 24)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
2a: ALPHA-L-FUCOSE (FUCa)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
4a: 3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN... (MBTa)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
6c: SULFATE ION (SO4c)
6d: SULFATE ION (SO4d)
6e: SULFATE ION (SO4e)
6f: SULFATE ION (SO4f)
6g: SULFATE ION (SO4g)
6h: SULFATE ION (SO4h)
6i: SULFATE ION (SO4i)
6j: SULFATE ION (SO4j)
6k: SULFATE ION (SO4k)
6l: SULFATE ION (SO4l)
6m: SULFATE ION (SO4m)
6n: SULFATE ION (SO4n)
6o: SULFATE ION (SO4o)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
3
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
4
MBT
1
Ligand/Ion
3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM
5
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
SO4
15
Ligand/Ion
SULFATE ION
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:70 , TYR A:121 , TRP A:279 , PHE A:330 , PHE A:331 , TYR A:334 , HOH A:702
binding site for residue MBT A 601
02
AC2
SOFTWARE
SER A:237 , ARG A:243
binding site for residue SO4 A 610
03
AC3
SOFTWARE
LYS A:346 , GLY A:384
binding site for residue SO4 A 611
04
AC4
SOFTWARE
MET A:379 , HIS A:513 , GLN A:514
binding site for residue SO4 A 612
05
AC5
SOFTWARE
PRO A:106 , LYS A:107 , SER A:108 , THR A:109
binding site for residue SO4 A 613
06
AC6
SOFTWARE
HIS A:406 , ASN A:525 , GLN A:526
binding site for residue SO4 A 614
07
AC7
SOFTWARE
ASN A:424 , HIS A:425 , ASN A:506 , THR A:507 , GLU A:508
binding site for residue SO4 A 615
08
AC8
SOFTWARE
THR A:459 , ALA A:460 , GLU A:461
binding site for residue SO4 A 616
09
AC9
SOFTWARE
VAL A:22 , LEU A:23 , LYS A:133 , TYR A:134
binding site for residue SO4 A 617
10
AD1
SOFTWARE
ARG A:289 , VAL A:360 , PRO A:361 , HIS A:362 , HIS A:398
binding site for residue SO4 A 618
11
AD2
SOFTWARE
PRO A:433 , GLU A:434
binding site for residue SO4 A 619
12
AD3
SOFTWARE
GLN A:68 , SER A:91 , GLU A:92
binding site for residue SO4 A 620
13
AD4
SOFTWARE
PRO A:213 , SER A:343 , GLU A:344
binding site for residue SO4 A 621
14
AD5
SOFTWARE
SER A:490 , LYS A:491
binding site for residue SO4 A 622
15
AD6
SOFTWARE
PRO A:76 , ARG A:220 , ARG A:221 , GLN A:318 , ASN A:416
binding site for residue SO4 A 623
16
AD7
SOFTWARE
ARG A:46 , GLN A:162 , ASN A:382
binding site for residue SO4 A 624
17
AD8
SOFTWARE
ASN A:59 , SER A:61
binding site for Poly-Saccharide residues NAG A 602 through FUC A 603 bound to ASN A 59
18
AD9
SOFTWARE
ASN A:416 , MAN A:609
binding site for Mono-Saccharide NAG A 604 bound to ASN A 416
19
AE1
SOFTWARE
LYS A:413 , PHE A:414 , GLU A:455 , ASN A:457 , NAG A:604
binding site for Poly-Saccharide residues NAG A 605 through MAN A 609 bound to ASN A 457
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (186 KB)
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