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5DCB
Asym. Unit
Info
Asym.Unit (457 KB)
Biol.Unit 1 (450 KB)
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(1)
Title
:
NEISSERIA MENINGITIDIS 3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE REGULATED AND COMPLEXED WITH PEP
Authors
:
L. C. Heyes, E. J. Parker
Date
:
23 Aug 15 (Deposition) - 24 Aug 16 (Release) - 24 Aug 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Dah7Ps, Regulated, Allostery, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. C. Heyes, E. J. Parker
Structure Of Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase Regulated And Complexed With Pep At 2. 05 Angstroms
To Be Published
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Hetero Components
(8, 23)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
3c: MANGANESE (II) ION (MNc)
3d: MANGANESE (II) ION (MNd)
4a: DI(HYDROXYETHYL)ETHER (PEGa)
4b: DI(HYDROXYETHYL)ETHER (PEGb)
5a: PHOSPHOENOLPYRUVATE (PEPa)
5b: PHOSPHOENOLPYRUVATE (PEPb)
5c: PHOSPHOENOLPYRUVATE (PEPc)
5d: PHOSPHOENOLPYRUVATE (PEPd)
6a: TRIETHYLENE GLYCOL (PGEa)
7a: PHENYLALANINE (PHEa)
7b: PHENYLALANINE (PHEb)
7c: PHENYLALANINE (PHEc)
7d: PHENYLALANINE (PHEd)
8a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
2
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
3
MN
4
Ligand/Ion
MANGANESE (II) ION
4
PEG
2
Ligand/Ion
DI(HYDROXYETHYL)ETHER
5
PEP
4
Ligand/Ion
PHOSPHOENOLPYRUVATE
6
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
7
PHE
4
Mod. Amino Acid
PHENYLALANINE
8
SO4
1
Ligand/Ion
SULFATE ION
[
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:63 , HIS A:270 , GLU A:304 , ASP A:324 , HOH A:503
binding site for residue MN A 401
02
AC2
SOFTWARE
SER A:206 , HIS A:207 , GLY A:226 , HOH A:502
binding site for residue SO4 A 402
03
AC3
SOFTWARE
GLY A:193 , ASN A:194 , LEU A:195 , LYS A:196 , HOH A:551
binding site for residue EDO A 404
04
AC4
SOFTWARE
ASP A:112 , LEU A:115 , ASP A:313
binding site for residue PEG A 405
05
AC5
SOFTWARE
GLN A:172 , ARG A:175 , ALA A:204 , HIS A:207 , SER A:208 , HIS A:209 , HOH A:509 , HOH A:541 , HOH A:643 , HOH A:645 , ARG B:101 , THR B:102 , THR B:103 , VAL B:104 , LYS B:107 , HOH B:534
binding site for residue PGE A 406
06
AC6
SOFTWARE
ARG A:94 , TYR A:96 , LYS A:99 , GLU A:145 , LYS A:188 , ARG A:236 , HIS A:270 , HOH A:503 , HOH A:548 , HOH A:562 , HOH A:604
binding site for residue PEP A 407
07
AC7
SOFTWARE
MET A:149 , GLN A:153 , ALA A:156 , GLY A:180 , LEU A:181 , SER A:182 , PHE A:211 , SER A:213 , LYS A:216 , ASP B:8 , ASP B:9 , HOH B:623
binding site for residue PHE A 408
08
AC8
SOFTWARE
THR A:215 , LYS A:216 , HOH B:592
binding site for residue CL A 409
09
AC9
SOFTWARE
CYS B:63 , HIS B:270 , GLU B:304 , ASP B:324 , HOH B:528
binding site for residue MN B 401
10
AD1
SOFTWARE
TRP B:106 , ASP B:112 , LEU B:115
binding site for residue EDO B 402
11
AD2
SOFTWARE
ARG B:94 , TYR B:96 , LYS B:99 , GLU B:145 , LYS B:188 , ARG B:236 , HIS B:270 , HOH B:513 , HOH B:515 , HOH B:528 , HOH B:612 , HOH B:621
binding site for residue PEP B 403
12
AD3
SOFTWARE
ASP A:8 , ASP A:9 , HOH A:516 , MET B:149 , GLN B:153 , ALA B:156 , GLY B:180 , LEU B:181 , SER B:182 , PHE B:211 , SER B:213 , VAL B:223
binding site for residue PHE B 404
13
AD4
SOFTWARE
HOH A:708 , THR B:215 , LYS B:216 , HOH B:671
binding site for residue CL B 405
14
AD5
SOFTWARE
CYS C:63 , ARG C:94 , HIS C:270 , GLU C:304 , ASP C:324 , HOH C:503
binding site for residue MN C 401
15
AD6
SOFTWARE
ARG C:94 , TYR C:96 , LYS C:99 , GLU C:145 , LYS C:188 , ARG C:236 , HIS C:270 , HOH C:502 , HOH C:503 , HOH C:532 , HOH C:562
binding site for residue PEP C 402
16
AD7
SOFTWARE
MET C:149 , GLN C:153 , ALA C:156 , GLY C:180 , LEU C:181 , SER C:182 , PHE C:211 , SER C:213 , LYS C:216 , VAL C:223 , HOH C:540 , ASP D:8 , ASP D:9
binding site for residue PHE C 403
17
AD8
SOFTWARE
CYS D:63 , HIS D:270 , GLU D:304 , ASP D:324 , HOH D:569
binding site for residue MN D 401
18
AD9
SOFTWARE
TRP D:106 , ASP D:112 , LEU D:115 , HOH D:568
binding site for residue PEG D 403
19
AE1
SOFTWARE
ARG D:94 , TYR D:96 , LYS D:99 , GLU D:145 , LYS D:188 , ARG D:236 , HIS D:270 , MET D:302 , HOH D:509 , HOH D:549 , HOH D:569 , HOH D:615 , HOH D:617
binding site for residue PEP D 404
20
AE2
SOFTWARE
ASP C:8 , ASP C:9 , HOH C:535 , GLN D:153 , ALA D:156 , GLY D:180 , LEU D:181 , SER D:182 , PHE D:211 , SER D:213 , LYS D:216 , VAL D:223
binding site for residue PHE D 405
21
AE3
SOFTWARE
HIS A:219 , HIS D:219
binding site for residue CL D 406
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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