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5DBY
Asym. Unit
Info
Asym.Unit (207 KB)
Biol.Unit 1 (199 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF EQUINE SERUM ALBUMIN IN COMPLEX WITH DICLOFENAC AND NAPROXEN OBTAINED IN DISPLACEMENT EXPERIMENT
Authors
:
B. Sekula, A. Bujacz, G. Bujacz
Date
:
22 Aug 15 (Deposition) - 23 Dec 15 (Release) - 27 Jan 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Helical, Three-Domain Protein, Serum Albumin, Transport Protein, Drugs Delivery, Diclofenac, Naproxen
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Sekula, A. Bujacz
Structural Insights Into The Competitive Binding Of Diclofenac And Naproxen By Equine Serum Albumin.
J. Med. Chem. V. 59 82 2016
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Hetero Components
(7, 17)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
2a: 2-[2,6-DICHLOROPHENYL)AMINO]BENZEN... (DIFa)
3a: FORMIC ACID (FMTa)
3b: FORMIC ACID (FMTb)
4a: (2S)-2-HYDROXYBUTANEDIOIC ACID (LMRa)
5a: MALONATE ION (MLIa)
5b: MALONATE ION (MLIb)
5c: MALONATE ION (MLIc)
5d: MALONATE ION (MLId)
5e: MALONATE ION (MLIe)
6a: (2S)-2-(6-METHOXYNAPHTHALEN-2-YL)P... (NPSa)
7a: SUCCINIC ACID (SINa)
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Label:
No.
Name
Count
Type
Full Name
1
ACT
6
Ligand/Ion
ACETATE ION
2
DIF
1
Ligand/Ion
2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID
3
FMT
2
Ligand/Ion
FORMIC ACID
4
LMR
1
Ligand/Ion
(2S)-2-HYDROXYBUTANEDIOIC ACID
5
MLI
5
Ligand/Ion
MALONATE ION
6
NPS
1
Ligand/Ion
(2S)-2-(6-METHOXYNAPHTHALEN-2-YL)PROPANOIC ACID
7
SIN
1
Ligand/Ion
SUCCINIC ACID
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:401 , ALA A:405 , VAL A:408 , LYS A:540 , GLU A:541 , LYS A:544 , ACT A:613 , HOH A:783
binding site for residue DIF A 601
02
AC2
SOFTWARE
LEU A:386 , ASN A:390 , PHE A:402 , ARG A:409 , TYR A:410 , LYS A:413 , LEU A:429 , SER A:448 , LEU A:452 , SER A:488 , HOH A:717
binding site for residue NPS A 602
03
AC3
SOFTWARE
TYR A:333 , ARG A:336 , HIS A:337
binding site for residue MLI A 603
04
AC4
SOFTWARE
GLY A:206 , GLU A:207 , ARG A:208
binding site for residue MLI A 604
05
AC5
SOFTWARE
LYS A:412 , ALA A:538 , THR A:539 , LYS A:540
binding site for residue MLI A 605
06
AC6
SOFTWARE
ALA A:303 , LEU A:304 , ALA A:305 , ARG A:336 , GLU A:561
binding site for residue MLI A 606
07
AC7
SOFTWARE
LEU A:190 , ALA A:193 , THR A:428 , HIS A:451 , LEU A:454 , ALA A:455
binding site for residue MLI A 607
08
AC8
SOFTWARE
TYR A:149 , ARG A:256 , SER A:286 , ILE A:289 , ALA A:290 , ACT A:617 , HOH A:712 , HOH A:725
binding site for residue SIN A 608
09
AC9
SOFTWARE
LYS A:499 , LYS A:533
binding site for residue ACT A 610
10
AD1
SOFTWARE
LYS A:350 , SER A:479 , LEU A:480 , ALA A:481
binding site for residue ACT A 611
11
AD2
SOFTWARE
SER A:65 , HIS A:67 , PRO A:96
binding site for residue ACT A 612
12
AD3
SOFTWARE
ARG A:409 , LYS A:540 , DIF A:601
binding site for residue ACT A 613
13
AD4
SOFTWARE
ARG A:144 , HIS A:145 , LYS A:185
binding site for residue FMT A 614
14
AD5
SOFTWARE
LYS A:198 , SER A:201 , TRP A:213
binding site for residue FMT A 615
15
AD6
SOFTWARE
LYS A:194 , ARG A:217 , LYS A:221 , GLU A:291 , ACT A:617 , HOH A:736
binding site for residue LMR A 616
16
AD7
SOFTWARE
TRP A:213 , LEU A:237 , SIN A:608 , LMR A:616 , HOH A:725
binding site for residue ACT A 617
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (207 KB)
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