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5D3D
Biol. Unit 2
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Asym.Unit (148 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL SUPERANTIGEN-LIKE PROTEIN 3
Authors
:
L. J. Feitsma, E. G. Huizinga
Date
:
06 Aug 15 (Deposition) - 19 Aug 15 (Release) - 09 Sep 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.94
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Superantigens, Superantigen-Like Proteins, Ssl, Ssl3, Toll-Like Receptor 2, Tlr2, Immunology, Inflammation, Inhibition, Immune System
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. J. Koymans, L. J. Feitsma, T. H. Brondijk, P. C. Aerts, E. Lukkien, P. Lossl, K. P. Van Kessel, C. J. De Haas, J. A. Van Strijp, E. G. Huizinga
Structural Basis For Inhibition Of Tlr2 By Staphylococcal Superantigen-Like Protein 3 (Ssl3).
Proc. Natl. Acad. Sci. Usa V. 112 11018 2015
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
3a: SODIUM ION (NAa)
4a: THIOCYANATE ION (SCNa)
4b: THIOCYANATE ION (SCNb)
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No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
GOL
2
Ligand/Ion
GLYCEROL
3
NA
-1
Ligand/Ion
SODIUM ION
4
SCN
1
Ligand/Ion
THIOCYANATE ION
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Sites
(8, 8)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
5: AC9 (SOFTWARE)
6: AD1 (SOFTWARE)
7: AD2 (SOFTWARE)
8: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
GLU A:205 , VAL A:216 , LYS A:303 , GLU A:306 , HOH A:504 , HOH A:506 , TYR B:209
binding site for residue GOL A 405
2
AC6
SOFTWARE
LYS A:230 , GLU A:232 , GLU A:250 , ASN B:174
binding site for residue GOL A 406
3
AC7
SOFTWARE
ARG A:175 , ILE B:172 , PRO B:173 , ASN B:174
binding site for residue GOL A 407
4
AC8
SOFTWARE
ASN B:292 , ASN B:317
binding site for residue CL B 401
5
AC9
SOFTWARE
LYS A:161 , MET B:159 , GLY B:193 , PRO B:194
binding site for residue SCN B 402
6
AD1
SOFTWARE
SER B:149 , GLU B:151 , PHE B:201
binding site for residue NA B 403
7
AD2
SOFTWARE
THR B:297 , GLU B:299 , GLN B:305 , ARG B:308 , HOH B:502 , HOH B:534
binding site for residue GOL B 404
8
AD3
SOFTWARE
GLU B:151 , VAL B:200 , PHE B:201 , LYS B:255 , GLU B:262 , HOH B:514
binding site for residue GOL B 405
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SAPs(SNPs)/Variants
(0, 0)
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CATH Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (148 KB)
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