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5D0U
Asym. Unit
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Asym.Unit (253 KB)
Biol.Unit 1 (248 KB)
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Title
:
CRYSTAL STRUCTURE OF THE RNA-HELICASE PRP43 FROM CHAETOMIUM THERMOPHILUM BOUND TO ADP
Authors
:
M. J. Tauchert, R. Ficner
Date
:
03 Aug 15 (Deposition) - 10 Feb 16 (Release) - 27 Jul 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.92
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Spliceosome, Rna-Helicase, Deah-Box Protein, Dhx15, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Tauchert, J. B. Fourmann, H. Christian, R. Luhrmann, R. Ficner
Structural And Functional Analysis Of The Rna Helicase Prp4 From The Thermophilic Eukaryote Chaetomium Thermophilum.
Acta Crystallogr. , Sect. F V. 72 112 2016
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2a: DIMETHYL SULFOXIDE (DMSa)
2b: DIMETHYL SULFOXIDE (DMSb)
2c: DIMETHYL SULFOXIDE (DMSc)
2d: DIMETHYL SULFOXIDE (DMSd)
2e: DIMETHYL SULFOXIDE (DMSe)
2f: DIMETHYL SULFOXIDE (DMSf)
2g: DIMETHYL SULFOXIDE (DMSg)
2h: DIMETHYL SULFOXIDE (DMSh)
2i: DIMETHYL SULFOXIDE (DMSi)
3a: MAGNESIUM ION (MGa)
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Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
DMS
9
Ligand/Ion
DIMETHYL SULFOXIDE
3
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:121 , GLY A:122 , SER A:123 , GLY A:124 , LYS A:125 , THR A:126 , THR A:127 , SER A:158 , ARG A:162 , PHE A:360 , ASP A:391 , ARG A:435 , MG A:802 , HOH A:901 , HOH A:903 , HOH A:904
binding site for residue ADP A 801
02
AC2
SOFTWARE
THR A:126 , ASP A:218 , GLU A:219 , SER A:387 , ADP A:801 , HOH A:901 , HOH A:902 , HOH A:903 , HOH A:904
binding site for residue MG A 802
03
AC3
SOFTWARE
ARG A:654 , TYR A:697 , ARG A:720
binding site for residue DMS A 803
04
AC4
SOFTWARE
GLU A:502 , ALA A:530 , GLY A:660 , MET A:663
binding site for residue DMS A 805
05
AC5
SOFTWARE
GLN A:711
binding site for residue DMS A 806
06
AC6
SOFTWARE
VAL A:556 , ASN A:703
binding site for residue DMS A 807
07
AC7
SOFTWARE
SER A:614 , TYR A:615 , ARG A:616
binding site for residue DMS A 808
08
AC8
SOFTWARE
TRP A:560 , LYS A:574 , SER A:690
binding site for residue DMS A 809
09
AC9
SOFTWARE
PRO A:399 , GLY A:400 , PHE A:401 , PRO A:420 , TYR A:445 , GLU A:453
binding site for residue DMS A 810
10
AD1
SOFTWARE
TYR A:505 , PRO A:729 , VAL A:730 , TYR A:731
binding site for residue DMS A 811
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (253 KB)
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