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5CZB
Asym. Unit
Info
Asym.Unit (392 KB)
Biol.Unit 1 (195 KB)
Biol.Unit 2 (195 KB)
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(1)
Title
:
HCV NS5B IN COMPLEX WITH LIGAND IDX17119-5
Authors
:
C. Pierra, C. Dousson, M. Augustin
Date
:
31 Jul 15 (Deposition) - 15 Jun 16 (Release) - 07 Sep 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.96
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hcv Polymerase, Idenix, Inhibitor, Proteros Biostructures Gmbh, Replication
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Pierra Rouviere, A. Amador, E. Badaroux, T. Convard, D. Da Costa, D. Dukhan, L. Griffe, J. F. Griffon, M. Lacolla, F. Leroy, M. Liuzzi, A. G. Loi, J. Mccarville, V. Mascia, J. Milhau, L. Onidi, J. L. Paparin, R. Rahali, E. Sais, M. Seifer, D. Surleraux, D. Standring, C. Dousson
Synthesis Of Potent And Broad Genotypically Active Ns5B Hcv Non-Nucleoside Inhibitors Binding To The Thumb Domain Allosteric Site 2 Of The Viral Polymerase.
Bioorg. Med. Chem. Lett. V. 26 4536 2016
[
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Hetero Components
(5, 29)
Info
All Hetero Components
1a: 1-[4-(7-AMINO-5-METHYLPYRAZOLO[1,5... (55Wa)
1b: 1-[4-(7-AMINO-5-METHYLPYRAZOLO[1,5... (55Wb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
3a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
4a: DI(HYDROXYETHYL)ETHER (PEGa)
4b: DI(HYDROXYETHYL)ETHER (PEGb)
4c: DI(HYDROXYETHYL)ETHER (PEGc)
4d: DI(HYDROXYETHYL)ETHER (PEGd)
4e: DI(HYDROXYETHYL)ETHER (PEGe)
4f: DI(HYDROXYETHYL)ETHER (PEGf)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
5h: SULFATE ION (SO4h)
5i: SULFATE ION (SO4i)
5j: SULFATE ION (SO4j)
5k: SULFATE ION (SO4k)
5l: SULFATE ION (SO4l)
5m: SULFATE ION (SO4m)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
55W
2
Ligand/Ion
1-[4-(7-AMINO-5-METHYLPYRAZOLO[1,5-A]PYRIMIDIN-2-YL)PHENYL]-3-{[(R)-(2,4-DIMETHYLPHENYL)(METHOXY)PHOSPHORYL]AMINO}-1H-PYRAZOLE-4-CARBOXYLIC ACID
2
GOL
7
Ligand/Ion
GLYCEROL
3
MES
1
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
4
PEG
6
Ligand/Ion
DI(HYDROXYETHYL)ETHER
5
SO4
13
Ligand/Ion
SULFATE ION
[
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Sites
(29, 29)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:422 , MET A:423 , LEU A:474 , HIS A:475 , SER A:476 , TYR A:477 , ILE A:482 , LEU A:489 , ARG A:490 , VAL A:494 , PRO A:495 , PRO A:496 , LEU A:497 , ARG A:501 , TRP A:528 , HOH A:739 , HOH A:760
binding site for residue 55W A 601
02
AC2
SOFTWARE
ALA A:97 , LYS A:98 , HOH A:822
binding site for residue GOL A 602
03
AC3
SOFTWARE
THR A:499 , ARG A:503 , HOH A:812
binding site for residue GOL A 603
04
AC4
SOFTWARE
LEU A:497 , ARG A:498 , ARG A:501 , GLU B:202 , VAL B:205 , ASN B:206 , TYR B:382
binding site for residue MES A 604
05
AC5
SOFTWARE
LEU A:83 , ARG A:120 , HOH A:708
binding site for residue PEG A 605
06
AC6
SOFTWARE
GLU A:248 , GLN A:251 , HOH A:862 , THR B:130 , GLU B:131 , ARG B:254 , GLU B:258
binding site for residue PEG A 606
07
AC7
SOFTWARE
LEU A:469 , SER A:470
binding site for residue PEG A 607
08
AC8
SOFTWARE
SER A:96 , ALA A:97 , GLY A:283 , GLY A:557 , HOH A:724
binding site for residue PEG A 608
09
AC9
SOFTWARE
GLU A:440 , GLY A:516 , ARG A:517
binding site for residue SO4 A 609
10
AD1
SOFTWARE
ARG A:498 , ARG A:505 , HOH A:953
binding site for residue SO4 A 610
11
AD2
SOFTWARE
SER A:112 , SER A:113 , HOH A:911
binding site for residue SO4 A 611
12
AD3
SOFTWARE
ARG A:48 , LYS A:51 , THR A:221 , CYS A:223 , HOH A:832 , HOH A:933
binding site for residue SO4 A 612
13
AD4
SOFTWARE
ARG A:114 , HOH A:749 , PRO B:22 , ILE B:23 , ASN B:24 , ARG B:401
binding site for residue SO4 A 613
14
AD5
SOFTWARE
HIS A:502 , ARG A:505 , HOH A:854
binding site for residue SO4 A 614
15
AD6
SOFTWARE
ARG A:498 , HOH A:705 , HOH A:713 , HOH A:740 , HOH A:937 , HOH A:988 , GLN B:199
binding site for residue SO4 A 615
16
AD7
SOFTWARE
THR A:287 , ASN A:291 , GLY A:317 , ASP A:318 , HOH A:774
binding site for residue SO4 A 616
17
AD8
SOFTWARE
ARG A:32 , HIS A:33 , HIS A:34 , ASN A:35
binding site for residue SO4 A 617
18
AD9
SOFTWARE
LYS A:79 , ASP A:244 , HOH A:1003 , LEU B:60 , LEU B:68 , HOH B:764
binding site for residue SO4 A 618
19
AE1
SOFTWARE
LEU B:419 , ARG B:422 , MET B:423 , LEU B:474 , HIS B:475 , SER B:476 , TYR B:477 , ILE B:482 , LEU B:489 , ARG B:490 , VAL B:494 , PRO B:495 , PRO B:496 , LEU B:497 , TRP B:528 , SO4 B:611 , HOH B:816 , HOH B:1003
binding site for residue 55W B 601
20
AE2
SOFTWARE
ARG B:380 , TYR B:382 , HOH B:970
binding site for residue GOL B 602
21
AE3
SOFTWARE
SER B:96 , ALA B:97 , PHE B:162 , ARG B:168
binding site for residue GOL B 603
22
AE4
SOFTWARE
ARG B:43 , HOH B:940
binding site for residue GOL B 604
23
AE5
SOFTWARE
GLU B:143 , GLN B:446 , SER B:556 , HOH B:864
binding site for residue GOL B 605
24
AE6
SOFTWARE
HIS B:502 , ARG B:505
binding site for residue GOL B 606
25
AE7
SOFTWARE
GLU A:124 , ASP A:125 , GLU A:128 , HOH A:827 , ARG B:32 , PRO B:496 , THR B:499 , HOH B:969
binding site for residue PEG B 607
26
AE8
SOFTWARE
GLU B:464 , LEU B:469 , SER B:470 , HOH B:730
binding site for residue PEG B 608
27
AE9
SOFTWARE
THR B:287 , SER B:288 , ASN B:291 , GLY B:317 , ASP B:318 , SER B:556 , HOH B:955
binding site for residue SO4 B 609
28
AF1
SOFTWARE
GLY B:516 , ARG B:517
binding site for residue SO4 B 610
29
AF2
SOFTWARE
PRO B:496 , LEU B:497 , ARG B:498 , 55W B:601 , HOH B:1011
binding site for residue SO4 B 611
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (392 KB)
Header - Asym.Unit
Biol.Unit 1 (195 KB)
Header - Biol.Unit 1
Biol.Unit 2 (195 KB)
Header - Biol.Unit 2
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