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5CHR
Biol. Unit 1
Info
Asym.Unit (58 KB)
Biol.Unit 1 (28 KB)
Biol.Unit 2 (27 KB)
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(1)
Title
:
DEHALOPEROXIDASE B IN COMPLEX WITH SUBSTRATE P-NITROCATECHOL
Authors
:
L. Carey, R. Ghiladi
Date
:
10 Jul 15 (Deposition) - 27 Apr 16 (Release) - 01 Jun 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.98
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Substrate, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. L. Mccombs, J. D'Antonio, D. A. Barrios, L. M. Carey, R. A. Ghiladi
Nonmicrobial Nitrophenol Degradation Via Peroxygenase Activity Of Dehaloperoxidase-Hemoglobin From Amphitrite Ornata.
Biochemistry V. 55 2465 2016
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Hetero Components
(5, 7)
Info
All Hetero Components
1a: 4-NITROCATECHOL (4NCa)
1b: 4-NITROCATECHOL (4NCb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4a: OXYGEN MOLECULE (OXYa)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
4NC
1
Ligand/Ion
4-NITROCATECHOL
2
GOL
2
Ligand/Ion
GLYCEROL
3
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
OXY
1
Ligand/Ion
OXYGEN MOLECULE
5
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AD1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:31 , ASN A:34 , PHE A:35 , HIS A:55 , LYS A:58 , VAL A:59 , MET A:63 , MET A:86 , GLN A:88 , HIS A:89 , LEU A:92 , ASN A:96 , PHE A:97 , LEU A:127 , 4NC A:204 , OXY A:205
binding site for residue HEM A 201
2
AC2
SOFTWARE
GLY A:1 , PHE A:2 , LYS A:3 , HOH A:336 , HOH A:371 , LYS B:32 , VAL B:39 , GLY B:40 , HOH B:301
binding site for residue SO4 A 202
3
AC3
SOFTWARE
LYS A:32 , VAL A:39 , GLY A:40 , HOH A:313 , HOH A:318 , HOH A:389 , GLY B:1 , PHE B:2 , LYS B:3 , HOH B:309
binding site for residue SO4 A 203
4
AC4
SOFTWARE
PHE A:21 , PHE A:35 , TYR A:38 , PHE A:52 , HIS A:55 , THR A:56 , VAL A:59 , PHE A:60 , HEM A:201 , OXY A:205
binding site for residue 4NC A 204
5
AC5
SOFTWARE
HIS A:55 , VAL A:59 , HEM A:201 , 4NC A:204
binding site for residue OXY A 205
6
AC6
SOFTWARE
GLN A:4 , ASP A:5 , THR A:8 , GLN A:113 , SER A:114 , HOH B:304
binding site for residue GOL A 206
7
AC7
SOFTWARE
SER A:42 , GLN A:44 , GLU A:45 , GLU A:65 , ARG A:69 , HOH A:301 , HOH A:303 , HOH A:305 , HOH A:338 , ALA B:7
binding site for residue GOL A 207
8
AD1
SOFTWARE
LYS A:99 , THR B:93 , LYS B:99 , HOH B:305
binding site for residue GOL B 203
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Exons
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SCOP Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (58 KB)
Header - Asym.Unit
Biol.Unit 1 (28 KB)
Header - Biol.Unit 1
Biol.Unit 2 (27 KB)
Header - Biol.Unit 2
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