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5CH7
Biol. Unit 2
Info
Asym.Unit (656 KB)
Biol.Unit 1 (226 KB)
Biol.Unit 2 (219 KB)
Biol.Unit 3 (224 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE PERCHLORATE REDUCTASE PCRAB - PHE164 GATE SWITCH INTERMEDIATE - FROM AZOSPIRA SUILLUM PS
Authors
:
C. -L. Tsai, J. A. Tainer
Date
:
10 Jul 15 (Deposition) - 09 Mar 16 (Release) - 11 May 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Keywords
:
Electron-Shuttling Protein, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. D. Youngblut, C. L. Tsai, I. C. Clark, H. K. Carlson, A. P. Maglaqui, P. S. Gau-Pan, S. A. Redford, A. Wong, J. A. Tainer, J. D. Coates
Perchlorate Reductase Is Distinguished By Active Site Aromatic Gate Residues.
J. Biol. Chem. V. 291 9190 2016
[
close entry info
]
Hetero Components
(7, 14)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
3a: FE3-S4 CLUSTER (F3Sa)
3b: FE3-S4 CLUSTER (F3Sb)
3c: FE3-S4 CLUSTER (F3Sc)
4a: GLYCEROL (GOLa)
5a: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1a)
5b: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1b)
5c: PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3... (MD1c)
6a: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDa)
6b: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDb)
6c: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,... (MGDc)
7a: MOLYBDENUM ATOM (MOa)
7b: MOLYBDENUM ATOM (MOb)
7c: MOLYBDENUM ATOM (MOc)
8a: SODIUM ION (NAa)
8b: SODIUM ION (NAb)
8c: SODIUM ION (NAc)
8d: SODIUM ION (NAd)
9a: IRON/SULFUR CLUSTER (SF4a)
9b: IRON/SULFUR CLUSTER (SF4b)
9c: IRON/SULFUR CLUSTER (SF4c)
9d: IRON/SULFUR CLUSTER (SF4d)
9e: IRON/SULFUR CLUSTER (SF4e)
9f: IRON/SULFUR CLUSTER (SF4f)
9g: IRON/SULFUR CLUSTER (SF4g)
9h: IRON/SULFUR CLUSTER (SF4h)
9i: IRON/SULFUR CLUSTER (SF4i)
9j: IRON/SULFUR CLUSTER (SF4j)
9k: IRON/SULFUR CLUSTER (SF4k)
9l: IRON/SULFUR CLUSTER (SF4l)
10a: SULFITE ION (SO3a)
10b: SULFITE ION (SO3b)
10c: SULFITE ION (SO3c)
10d: SULFITE ION (SO3d)
10e: SULFITE ION (SO3e)
11a: ZINC ION (ZNa)
11b: ZINC ION (ZNb)
11c: ZINC ION (ZNc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
3
F3S
1
Ligand/Ion
FE3-S4 CLUSTER
4
GOL
-1
Ligand/Ion
GLYCEROL
5
MD1
1
Ligand/Ion
PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YLESTER GUANYLATE ESTER
6
MGD
1
Ligand/Ion
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINEDINUCLEOTIDE
7
MO
-1
Ligand/Ion
MOLYBDENUM ATOM
8
NA
-1
Ligand/Ion
SODIUM ION
9
SF4
4
Ligand/Ion
IRON/SULFUR CLUSTER
10
SO3
2
Ligand/Ion
SULFITE ION
11
ZN
-1
Ligand/Ion
ZINC ION
[
close Hetero Component info
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Sites
(17, 17)
Info
All Sites
01: AE3 (SOFTWARE)
02: AE4 (SOFTWARE)
03: AE5 (SOFTWARE)
04: AE6 (SOFTWARE)
05: AE7 (SOFTWARE)
06: AE8 (SOFTWARE)
07: AE9 (SOFTWARE)
08: AF1 (SOFTWARE)
09: AF2 (SOFTWARE)
10: AF3 (SOFTWARE)
11: AF4 (SOFTWARE)
12: AF5 (SOFTWARE)
13: AF6 (SOFTWARE)
14: AF7 (SOFTWARE)
15: AF8 (SOFTWARE)
16: AF9 (SOFTWARE)
17: AG1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AE3
SOFTWARE
HIS C:32 , CYS C:36 , ALA C:39 , CYS C:40 , GLY C:73 , CYS C:74
binding site for residue SF4 C 1001
02
AE4
SOFTWARE
ASP C:170 , MGD C:1003 , MD1 C:1004
binding site for residue MO C 1002
03
AE5
SOFTWARE
LYS C:76 , ASP C:170 , TRP C:200 , GLY C:201 , SER C:202 , ASN C:203 , GLN C:206 , THR C:207 , ILE C:228 , SER C:229 , PRO C:230 , ASP C:231 , ASN C:233 , GLY C:248 , ASP C:250 , GLY C:421 , GLY C:422 , GLY C:423 , TRP C:427 , ILE C:458 , GLY C:459 , ASN C:761 , PRO C:763 , HIS C:764 , SER C:765 , ARG C:766 , SER C:768 , VAL C:769 , HIS C:770 , ARG C:830 , HIS C:835 , ARG C:882 , MO C:1002 , MD1 C:1004 , HOH C:1134 , HOH C:1189 , HOH C:1299 , HOH C:1326 , HOH C:1329
binding site for residue MGD C 1003
04
AE6
SOFTWARE
LEU C:33 , ASN C:35 , TYR C:168 , ASP C:170 , HIS C:426 , ARG C:537 , GLY C:538 , ASN C:539 , GLN C:543 , ILE C:564 , ASN C:565 , ILE C:566 , ARG C:567 , ASP C:569 , SER C:581 , TRP C:584 , LYS C:587 , ASP C:615 , SER C:762 , HIS C:764 , VAL C:769 , HIS C:770 , SER C:771 , THR C:772 , HIS C:835 , GLN C:849 , GLN C:881 , ARG C:882 , MO C:1002 , MGD C:1003 , HOH C:1201 , HOH C:1231 , HOH C:1233
binding site for residue MD1 C 1004
05
AE7
SOFTWARE
ILE C:751 , ASP C:752 , ALA C:753 , HOH C:1114 , HOH C:1334
binding site for residue EDO C 1005
06
AE8
SOFTWARE
GLU C:495 , ASN C:553 , HOH C:1173 , HOH C:1195 , HOH C:1221 , TRP E:806 , ARG F:103
binding site for residue EDO C 1006
07
AE9
SOFTWARE
VAL C:777
binding site for residue NA C 1007
08
AF1
SOFTWARE
GLN C:246 , PRO C:247 , HOH C:1226 , HOH C:1309
binding site for residue ACT C 1008
09
AF2
SOFTWARE
ASN C:804 , PRO C:896 , PRO D:110
binding site for residue SO3 C 1009
10
AF3
SOFTWARE
HIS C:81 , ZN C:1011
binding site for residue SO3 C 1010
11
AF4
SOFTWARE
HIS C:81 , ASP C:82 , SO3 C:1010 , LYS D:33
binding site for residue ZN C 1011
12
AF5
SOFTWARE
GLU A:495 , ASN A:553 , HOH A:1292 , TRP C:806 , ARG D:103 , HOH D:522 , HOH D:539
binding site for residue EDO D 401
13
AF6
SOFTWARE
CYS D:149 , CYS D:170 , LYS D:171 , GLY D:172 , ALA D:173 , GLN D:174 , ALA D:175 , CYS D:176 , ALA D:194
binding site for residue F3S D 402
14
AF7
SOFTWARE
CYS D:137 , ASN D:138 , CYS D:140 , CYS D:145 , CYS D:180
binding site for residue SF4 D 403
15
AF8
SOFTWARE
CYS D:21 , CYS D:24 , GLN D:25 , CYS D:27 , ARG D:47 , CYS D:216 , GLY D:218
binding site for residue SF4 D 404
16
AF9
SOFTWARE
CYS D:31 , TRP D:35 , ARG D:47 , CYS D:197 , CYS D:200 , CYS D:212
binding site for residue SF4 D 405
17
AG1
SOFTWARE
ILE D:82 , GLY D:85 , ILE D:86 , PHE D:88 , THR D:109 , PRO D:110 , ARG D:111 , SER D:112
binding site for residue EDO D 406
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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(0, 0)
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Pfam Domains
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