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5CGM
Asym. Unit
Info
Asym.Unit (246 KB)
Biol.Unit 1 (237 KB)
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(1)
Title
:
STRUCTURE OF MYCOBACTERIUM THERMORESISTIBILE GLGE IN COMPLEX WITH MALTOSE AT 1.95A RESOLUTION
Authors
:
V. Mendes, M. Blaszczyk, A. Maranha, N. Empadinhas, T. L. Blundell
Date
:
09 Jul 15 (Deposition) - 09 Dec 15 (Release) - 09 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Glge, Maltose, Gh13, Maltosyltransferase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. Mendes, M. Blaszczyk, A. Maranha, N. Empadinhas, T. L. Blundell
Structure Of Mycobacterium Thermoresistibile Glge Defines Novel Conformational States That Contribute To The Catalyti Mechanism.
Sci Rep V. 5 17144 2015
[
close entry info
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Hetero Components
(9, 49)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
3h: 1,2-ETHANEDIOL (EDOh)
3i: 1,2-ETHANEDIOL (EDOi)
3j: 1,2-ETHANEDIOL (EDOj)
3k: 1,2-ETHANEDIOL (EDOk)
4a: MALTOSE (MALa)
4b: MALTOSE (MALb)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
5d: SODIUM ION (NAd)
5e: SODIUM ION (NAe)
5f: SODIUM ION (NAf)
5g: SODIUM ION (NAg)
5h: SODIUM ION (NAh)
5i: SODIUM ION (NAi)
5j: SODIUM ION (NAj)
5k: SODIUM ION (NAk)
5l: SODIUM ION (NAl)
5m: SODIUM ION (NAm)
5n: SODIUM ION (NAn)
5o: SODIUM ION (NAo)
5p: SODIUM ION (NAp)
5q: SODIUM ION (NAq)
5r: SODIUM ION (NAr)
5s: SODIUM ION (NAs)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
6c: DI(HYDROXYETHYL)ETHER (PEGc)
6d: DI(HYDROXYETHYL)ETHER (PEGd)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
7c: TETRAETHYLENE GLYCOL (PG4c)
8a: TRIETHYLENE GLYCOL (PGEa)
8b: TRIETHYLENE GLYCOL (PGEb)
9a: PHOSPHATE ION (PO4a)
9b: PHOSPHATE ION (PO4b)
9c: PHOSPHATE ION (PO4c)
9d: PHOSPHATE ION (PO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
2
Ligand/Ion
PENTAETHYLENE GLYCOL
2
CL
2
Ligand/Ion
CHLORIDE ION
3
EDO
11
Ligand/Ion
1,2-ETHANEDIOL
4
MAL
2
Ligand/Ion
MALTOSE
5
NA
19
Ligand/Ion
SODIUM ION
6
PEG
4
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG4
3
Ligand/Ion
TETRAETHYLENE GLYCOL
8
PGE
2
Ligand/Ion
TRIETHYLENE GLYCOL
9
PO4
4
Ligand/Ion
PHOSPHATE ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
47: AH2 (SOFTWARE)
48: AH3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:283 , ASN A:287 , SER A:298 , TRP A:300 , ALA A:301 , GLN A:343 , TYR A:376 , ASP A:378 , ARG A:411 , ASP A:413 , ASN A:414 , GLU A:442 , ASP A:498 , LYS A:552 , TYR A:553 , NA A:711 , HOH A:871 , HOH A:990
binding site for residue MAL A 701
02
AC2
SOFTWARE
GLY A:96 , HIS A:97 , THR A:98 , HIS A:103 , ARG A:694 , GLU A:696
binding site for residue PO4 A 702
03
AC3
SOFTWARE
PHE A:444 , THR A:445 , ARG A:446 , ARG A:449 , PEG A:723 , HOH A:910 , HOH A:911
binding site for residue PO4 A 703
04
AC4
SOFTWARE
LEU A:150 , ARG A:154 , ARG A:179 , GLU A:630
binding site for residue NA A 704
05
AC5
SOFTWARE
SER A:0 , GLY A:212 , GLU A:213
binding site for residue NA A 705
06
AC6
SOFTWARE
PRO A:497 , GLU A:546 , TYR A:547 , SER A:550 , LYS A:552
binding site for residue NA A 706
07
AC7
SOFTWARE
GLY A:507 , GLY A:508 , PRO A:509 , GLY A:510 , PRO A:625
binding site for residue NA A 707
08
AC8
SOFTWARE
GLN A:538 , LEU A:548 , NA A:714 , HOH A:1022
binding site for residue NA A 708
09
AC9
SOFTWARE
GLU A:27 , ARG A:225 , HOH A:971
binding site for residue NA A 709
10
AD1
SOFTWARE
ASP A:9 , ALA A:33 , THR A:34 , GLU A:696
binding site for residue NA A 710
11
AD2
SOFTWARE
TRP A:300 , PRO A:497 , ASP A:498 , MAL A:701 , HOH A:807
binding site for residue NA A 711
12
AD3
SOFTWARE
ARG A:558 , PHE A:560 , HOH A:1014 , HOH A:1040 , HOH A:1280
binding site for residue NA A 712
13
AD4
SOFTWARE
SER A:328 , 1PE A:716 , HOH A:964
binding site for residue NA A 713
14
AD5
SOFTWARE
GLU A:536 , TYR A:547 , ARG A:556 , NA A:708 , HOH A:953
binding site for residue NA A 714
15
AD6
SOFTWARE
SER A:530 , HOH A:832 , HOH A:1014 , HOH A:1279
binding site for residue CL A 715
16
AD7
SOFTWARE
ALA A:255 , GLU A:324 , SER A:328 , ASP A:331 , ARG A:352 , NA A:713
binding site for residue 1PE A 716
17
AD8
SOFTWARE
TRP A:661 , TYR A:666 , ARG A:668 , HIS A:677
binding site for residue PGE A 717
18
AD9
SOFTWARE
ASP A:323 , ARG A:400 , ILE A:403 , SER A:404 , HIS A:405 , GLU A:433 , HOH A:805
binding site for residue PG4 A 718
19
AE1
SOFTWARE
GLN A:538 , LEU A:548 , ASN A:549 , ARG A:556 , HOH A:826 , GLU B:243 , ARG B:245
binding site for residue PG4 A 719
20
AE2
SOFTWARE
HIS A:248 , ARG A:282 , GLY A:294 , VAL A:296 , GLU A:306 , GLN A:315 , HOH A:882
binding site for residue PG4 A 720
21
AE3
SOFTWARE
ARG A:154 , THR A:632
binding site for residue PEG A 721
22
AE4
SOFTWARE
PRO A:95 , GLY A:96 , ASP A:100 , VAL A:101 , HOH A:813 , HOH A:894 , ARG B:446
binding site for residue PEG A 722
23
AE5
SOFTWARE
PHE A:444 , TRP A:467 , PO4 A:703 , HOH A:1088
binding site for residue PEG A 723
24
AE6
SOFTWARE
ARG A:468
binding site for residue EDO A 724
25
AE7
SOFTWARE
ARG A:446 , ASP B:100
binding site for residue EDO A 726
26
AE8
SOFTWARE
GLN A:11 , VAL A:13 , ASP A:486 , HOH A:833 , HOH A:1091
binding site for residue EDO A 727
27
AE9
SOFTWARE
HIS A:354 , GLU A:356 , ASP A:387 , HOH A:931
binding site for residue EDO A 728
28
AF1
SOFTWARE
LEU A:382 , PHE A:384 , THR A:417 , PRO A:419 , HOH A:802 , HOH A:1013 , HOH A:1077 , GLU B:38 , HOH B:890
binding site for residue EDO A 729
29
AF2
SOFTWARE
GLN A:89 , THR A:107 , TRP A:114 , HOH A:801
binding site for residue EDO A 730
30
AF3
SOFTWARE
HIS A:103 , HIS A:105 , LEU A:690 , ARG A:694 , HOH A:845
binding site for residue EDO A 731
31
AF4
SOFTWARE
LYS B:283 , ASN B:287 , SER B:298 , TRP B:300 , ALA B:301 , GLN B:343 , TYR B:376 , ASP B:378 , ARG B:411 , ASP B:413 , ASN B:414 , GLU B:442 , ASP B:498 , LYS B:552 , TYR B:553 , HOH B:856 , HOH B:965 , HOH B:1025
binding site for residue MAL B 701
32
AF5
SOFTWARE
GLY B:96 , HIS B:97 , THR B:98 , HIS B:103 , ARG B:694 , GLU B:696
binding site for residue PO4 B 702
33
AF6
SOFTWARE
THR B:445 , ARG B:446 , ARG B:449 , HOH B:950
binding site for residue PO4 B 703
34
AF7
SOFTWARE
GLY B:-1 , SER B:0 , GLY B:212 , GLU B:213 , HOH B:816
binding site for residue NA B 704
35
AF8
SOFTWARE
TYR B:392 , PRO B:419 , ASN B:421
binding site for residue NA B 705
36
AF9
SOFTWARE
ARG A:449 , HOH A:1015 , ARG B:37 , GLU B:38 , GLY B:39 , ASP B:41 , HOH B:1040
binding site for residue NA B 706
37
AG1
SOFTWARE
ASP B:9 , GLN B:11 , ALA B:33 , THR B:34 , GLU B:696
binding site for residue NA B 707
38
AG2
SOFTWARE
VAL B:35 , VAL B:43 , ASP B:100 , HOH B:1040
binding site for residue NA B 708
39
AG3
SOFTWARE
ALA B:520 , THR B:521 , GLY B:523 , PRO B:524 , LEU B:587 , LYS B:608
binding site for residue NA B 709
40
AG4
SOFTWARE
VAL B:28 , GLU B:589 , ARG B:591
binding site for residue NA B 710
41
AG5
SOFTWARE
ARG B:225 , PHE B:226
binding site for residue NA B 711
42
AG6
SOFTWARE
TYR B:56 , LEU B:59 , ILE B:427 , LEU B:456 , GLY B:457 , HOH B:894
binding site for residue CL B 712
43
AG7
SOFTWARE
TRP A:240 , ASP A:241 , ASP A:559 , TRP B:240 , ASP B:241 , ASP B:559 , HOH B:1012 , HOH B:1130
binding site for residue PGE B 713
44
AG8
SOFTWARE
ARG A:245 , GLN B:538 , LEU B:548 , ASN B:549 , ARG B:556 , HOH B:977
binding site for residue 1PE B 714
45
AG9
SOFTWARE
ARG A:245 , LEU B:534 , GLU B:536 , ASN B:537 , GLN B:538
binding site for residue PEG B 715
46
AH1
SOFTWARE
LYS B:471 , HIS B:596 , HIS B:597 , VAL B:598
binding site for residue EDO B 716
47
AH2
SOFTWARE
LYS B:22 , GLU B:27 , ALA B:485 , ARG B:591 , HOH B:858 , HOH B:878
binding site for residue EDO B 717
48
AH3
SOFTWARE
ALA B:45 , THR B:46 , PRO B:92 , MET B:93 , TRP B:121 , HOH B:848
binding site for residue EDO B 718
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (246 KB)
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