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5C9A
Biol. Unit 1
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Asym.Unit (145 KB)
Biol.Unit 1, α-C (7.5 MB)
Biol.Unit 1 (7.5 MB)
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(1)
Title
:
CRYSTAL STRUCTURE OF EMPTY COXSACKIEVIRUS A16 PARTICLE
Authors
:
J. Ren, X. Wang, L. Zhu, Z. Hu, Q. Gao, P. Yang, X. Li, J. Wang, X. Shen, E. E. Z. Rao, D. I. Stuart
Date
:
26 Jun 15 (Deposition) - 26 Aug 15 (Release) - 30 Sep 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (60x)
Keywords
:
Hand-Foot-And-Mouth Disease, Immunogenicity, Picornavirus, Icosahedral Virus, Virus
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Ren, X. Wang, L. Zhu, Z. Hu, Q. Gao, P. Yang, X. Li, J. Wang, X. Shen, E. E. Fry, Z. Rao, D. I. Stuart
Structures Of Coxsackievirus A16 Capsids With Native Antigenicity: Implications For Particle Expansion, Receptor Binding, And Immunogenicity.
J. Virol. V. 89 10500 2015
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Hetero Components
(1, 60)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
2a: POTASSIUM ION (Ka)
3a: SPHINGOSINE (SPHa)
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No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
K
-1
Ligand/Ion
POTASSIUM ION
3
SPH
60
Ligand/Ion
SPHINGOSINE
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:112 , LEU A:113 , MET A:114 , TYR A:155 , MET A:195 , ASN A:228 , MET A:230
binding site for residue SPH A 301
2
AC2
SOFTWARE
GLN A:189 , VAL C:20
binding site for residue K A 302
3
AC3
SOFTWARE
ARG A:236
binding site for residue CL A 303
4
AC4
SOFTWARE
HIS A:257 , VAL A:258 , GLN B:44
binding site for residue CL A 304
5
AC5
SOFTWARE
PRO B:232 , TYR B:233
binding site for residue CL B 401
6
AC6
SOFTWARE
LYS B:138 , SER B:139
binding site for residue CL B 402
7
AC7
SOFTWARE
THR B:137
binding site for residue CL B 403
8
AC8
SOFTWARE
ASN B:15 , LYS B:34
binding site for residue CL B 404
9
AC9
SOFTWARE
GLY C:91 , TRP C:111 , ALA C:181
binding site for residue CL C 301
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SAPs(SNPs)/Variants
(0, 0)
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Asym.Unit (145 KB)
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Biol.Unit 1 (7.5 MB)
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