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5C0A
Biol. Unit 1
Info
Asym.Unit (590 KB)
Biol.Unit 1 (293 KB)
Biol.Unit 2 (294 KB)
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(1)
Title
:
1E6 TCR IN COMPLEX WITH HLA-A02 CARRYING MVW PEPTIDE
Authors
:
P. J. Rizkallah, A. M. Bulek, D. K. Cole, A. K. Sewell
Date
:
12 Jun 15 (Deposition) - 04 May 16 (Release) - 08 Jun 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.46
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Immuno, Hla-A02, 1E6-Tcr, Cross-Reactivity, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. K. Cole, A. M. Bulek, G. Dolton, A. J. Schauenberg, B. Szomolay, W. Rittase, A. Trimby, P. Jothikumar, A. Fuller, A. Skowera, J. Rossjohn, C. Zhu, J. J. Miles, M. Peakman, L. Wooldridge, P. J. Rizkallah, A. K. Sewell
Hotspot Autoimmune T Cell Receptor Binding Underlies Pathogen And Insulin Peptide Cross-Reactivity.
J. Clin. Invest. V. 126 2191 2016
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
2
GOL
1
Ligand/Ion
GLYCEROL
3
SO4
5
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AE1 (SOFTWARE)
13: AE4 (SOFTWARE)
14: AE5 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:11 , PRO A:20 , PHE A:22 , SER A:71 , GLN A:72
binding site for residue EDO A 301
02
AC2
SOFTWARE
PHE A:36 , ASP A:37 , ALA A:40 , SER A:42 , GLN A:43 , ARG A:44 , GLU A:46
binding site for residue EDO A 302
03
AC3
SOFTWARE
SER A:13 , ARG A:14 , ARG A:17 , GLY A:18 , GLU A:19 , PRO A:20 , HOH A:401
binding site for residue SO4 A 303
04
AC4
SOFTWARE
VAL A:12 , ARG A:21 , HOH A:410 , SER B:33 , ASP B:34
binding site for residue GOL B 101
05
AC5
SOFTWARE
ARG D:92 , TYR D:97 , LEU D:99 , ASN E:103 , GLN E:105
binding site for residue EDO D 201
06
AC6
SOFTWARE
ARG D:77 , ILE I:18 , ARG I:77
binding site for residue EDO D 202
07
AC7
SOFTWARE
LEU D:11 , SER D:12 , VAL D:13 , ASP I:66 , TYR I:71
binding site for residue SO4 D 203
08
AC8
SOFTWARE
ALA E:2 , GLY E:3 , LYS E:24 , PRO E:25 , ILE E:26 , SER E:27 , GLU F:89
binding site for residue EDO E 301
09
AC9
SOFTWARE
HIS E:169 , SER E:170
binding site for residue SO4 E 302
10
AD1
SOFTWARE
ARG E:85 , LYS E:102 , HOH E:417
binding site for residue SO4 E 303
11
AD2
SOFTWARE
ARG E:22 , ARG F:17 , GLY F:18
binding site for residue SO4 E 304
12
AE1
SOFTWARE
GLU E:221 , LYS E:231 , ARG G:45 , GLU G:47 , LYS G:48
binding site for residue SO4 G 102
13
AE4
SOFTWARE
ARG D:110 , GLN D:142 , SER I:53 , VAL I:65 , ASP I:66 , LYS I:67 , SER I:68
binding site for residue EDO I 201
14
AE5
SOFTWARE
ARG A:17 , GLY A:18 , ARG J:22 , PHE J:74
binding site for residue GOL J 301
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (590 KB)
Header - Asym.Unit
Biol.Unit 1 (293 KB)
Header - Biol.Unit 1
Biol.Unit 2 (294 KB)
Header - Biol.Unit 2
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