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5BWT
Biol. Unit 1
Info
Asym.Unit (138 KB)
Biol.Unit 1 (132 KB)
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Title
:
X-RAY CRYSTAL STRUCTURE AT 2.20A RESOLUTION OF HUMAN MITOCHONDRIAL BRANCHED CHAIN AMINOTRANSFERASE (BCATM) COMPLEXED WITH A PYRAZOLOPYRIMIDINONE FRAGMENT AND AN INTERNAL ALDIMINE LINKED PLP.
Authors
:
D. O. Somers
Date
:
08 Jun 15 (Deposition) - 01 Jul 15 (Release) - 07 Oct 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Fold Type Iv, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Bertrand, N. Ancellin, B. Beaufils, R. P. Bingham, J. A. Borthwick, A. B. Boullay, E. Boursier, P. S. Carter, C. W. Chung, I. Churcher, N. Dodic, M. H. Fouchet, C. Fournier, P. L. Francis, L. A. Gummer, K. Herry, A. Hobbs, C. I. Hobbs, P. Homes, C. Jamieson, E. Nicodeme, S. D. Pickett, I. H. Reid, G. L. Simpson, L. A. Sloan, S. E. Smith, D. O. Somers, C. Spitzfaden, C. J. Suckling, K. Valko, Y. Washio, R. J. Young
The Discovery Of In Vivo Active Mitochondrial Branched-Chai Aminotransferase (Bcatm) Inhibitors By Hybridizing Fragment And Hts Hits.
J. Med. Chem. V. 58 7140 2015
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Hetero Components
(4, 11)
Info
All Hetero Components
1a: 5-ETHYL-2-METHYL-7-OXO-4,7-DIHYDRO... (4VSa)
1b: 5-ETHYL-2-METHYL-7-OXO-4,7-DIHYDRO... (4VSb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
4a: GLYCEROL (GOLa)
5a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
5b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
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Label:
No.
Name
Count
Type
Full Name
1
4VS
2
Ligand/Ion
5-ETHYL-2-METHYL-7-OXO-4,7-DIHYDROPYRAZOLO[1,5-A]PYRIMIDINE-3-CARBONITRILE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
4
GOL
1
Ligand/Ion
GLYCEROL
5
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:99 , ARG A:192 , LYS A:202 , TYR A:207 , GLU A:237 , THR A:240 , MET A:241 , ASN A:242 , GLY A:268 , VAL A:269 , VAL A:270 , GLY A:312 , THR A:313 , HOH A:563 , HOH A:574 , HOH A:593 , HOH A:668
binding site for residue PLP A 401
02
AC2
SOFTWARE
TYR A:141 , ARG A:143 , TYR A:173 , PHE A:174 , THR A:240 , MET A:241 , ALA A:314 , CYS A:315 , HOH A:646 , HOH A:658 , HOH A:664 , VAL B:155
binding site for residue 4VS A 402
03
AC3
SOFTWARE
ARG A:92 , TRP A:94 , HOH A:687 , HOH A:717
binding site for residue CL A 404
04
AC4
SOFTWARE
TYR A:246 , LEU A:341 , ARG A:344 , HOH A:573
binding site for residue EDO A 405
05
AC5
SOFTWARE
ASP A:276 , THR A:280 , ARG A:357 , HIS A:359 , TRP A:361
binding site for residue EDO A 406
06
AC6
SOFTWARE
GLU A:42 , LEU A:59 , THR A:60 , LEU A:162 , HOH A:630
binding site for residue EDO A 407
07
AC7
SOFTWARE
ASP A:276 , VAL A:286 , GLU A:288 , HOH A:537 , HOH A:683
binding site for residue GOL A 408
08
AC8
SOFTWARE
VAL A:155 , TYR B:141 , TYR B:173 , THR B:240 , MET B:241 , GLY B:312 , ALA B:314 , CYS B:315 , HOH B:598 , HOH B:665
binding site for residue 4VS B 402
09
AC9
SOFTWARE
HOH B:775
binding site for residue CL B 403
10
AD1
SOFTWARE
ASP B:276 , MET B:277 , THR B:280 , GLU B:348 , HIS B:359 , HOH B:526
binding site for residue EDO B 404
11
AD2
SOFTWARE
TYR B:246 , ARG B:306 , GLU B:340 , ARG B:344
binding site for residue EDO B 405
12
AD3
SOFTWARE
GLU B:42 , LEU B:59 , THR B:60
binding site for residue EDO B 406
13
AD4
SOFTWARE
LEU B:74 , PHE B:75 , ARG B:99 , SER B:103 , ARG B:192 , TYR B:201 , LEU B:203 , TYR B:207 , GLU B:237 , THR B:240 , MET B:241 , ASN B:242 , LEU B:266 , GLY B:268 , VAL B:269 , VAL B:270 , GLY B:312 , THR B:313 , HOH B:540 , HOH B:550 , HOH B:591 , HOH B:659
binding site for Di-peptide PLP B 401 and LYS B 202
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Exons
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SCOP Domains
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Asymmetric Unit 1
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Asym.Unit (138 KB)
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