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5BTP
Asym. Unit
Info
Asym.Unit (123 KB)
Biol.Unit 1 (60 KB)
Biol.Unit 2 (59 KB)
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(1)
Title
:
FUSOBACTERIUM ULCERANS ZTP RIBOSWITCH BOUND TO ZMP
Authors
:
C. P. Jones, A. R. Ferre-D'Amare
Date
:
03 Jun 15 (Deposition) - 12 Aug 15 (Release) - 16 Sep 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.82
Chains
:
Asym. Unit : A,B
Biol. Unit 1: B (1x)
Biol. Unit 2: A (1x)
Keywords
:
Rna
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. P. Jones, A. R. Ferre-D'Amare
Recognition Of The Bacterial Alarmone Zmp Through Long-Distance Association Of Two Rna Subdomains.
Nat. Struct. Mol. Biol. V. 22 679 2015
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Hetero Components
(3, 15)
Info
All Hetero Components
1a: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBON... (AMZa)
1b: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBON... (AMZb)
2a: POTASSIUM ION (Ka)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
3g: MAGNESIUM ION (MGg)
3h: MAGNESIUM ION (MGh)
3i: MAGNESIUM ION (MGi)
3j: MAGNESIUM ION (MGj)
3k: MAGNESIUM ION (MGk)
3l: MAGNESIUM ION (MGl)
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No.
Name
Count
Type
Full Name
1
AMZ
2
Ligand/Ion
AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE
2
K
1
Ligand/Ion
POTASSIUM ION
3
MG
12
Ligand/Ion
MAGNESIUM ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HOH B:204
binding site for residue MG B 101
02
AC2
SOFTWARE
C B:65
binding site for residue MG B 102
03
AC3
SOFTWARE
U B:16 , C B:35 , AMZ B:108 , HOH B:202 , HOH B:203
binding site for residue MG B 103
04
AC4
SOFTWARE
A A:22 , G B:21 , A B:22
binding site for residue MG B 104
05
AC5
SOFTWARE
U B:12 , G B:13
binding site for residue MG B 105
06
AC6
SOFTWARE
U B:16 , U B:40
binding site for residue MG B 106
07
AC7
SOFTWARE
U B:16 , G B:17 , A B:34 , C B:35 , G B:63 , C B:69 , U B:70 , G B:71 , MG B:103 , HOH B:202 , HOH B:203
binding site for residue AMZ B 108
08
AC8
SOFTWARE
G B:27
binding site for residue K B 109
09
AC9
SOFTWARE
U A:16 , U A:40
binding site for residue MG A 102
10
AD1
SOFTWARE
U A:16 , C A:35 , AMZ A:106 , HOH A:201 , HOH A:202
binding site for residue MG A 103
11
AD2
SOFTWARE
G A:20 , HOH A:203
binding site for residue MG A 104
12
AD3
SOFTWARE
U A:16 , G A:17 , A A:34 , C A:35 , G A:63 , C A:69 , U A:70 , G A:71 , MG A:103 , HOH A:201
binding site for residue AMZ A 106
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Exons
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SCOP Domains
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CATH Domains
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Asymmetric Unit 1
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Asym.Unit (123 KB)
Header - Asym.Unit
Biol.Unit 1 (60 KB)
Header - Biol.Unit 1
Biol.Unit 2 (59 KB)
Header - Biol.Unit 2
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